Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g4041 ATGGTTTCATTATTTAGTGTTTCATTGTTTCCCTTCACCCCACAAAACGCTTTATCTCCATCCACTAAATTTGCGCCTGCCGATGCAAGTACCACAAACTCCTTCTGTATTAAGCCCCGTATCGAACATAGGAAGGTTGTTTGTGCTTGCGTGGCTCCTCCGCGAAACTTCAAGAGCGATGAATCATCGGCAATCAAATTCAATGGTTCTTCTAAATCAGAACACTTACACACGATACGGGATCCTGAGGATGATTCTGATGTTCTTATTGAGTGTAGAGATGTCTATAAGTCTTTTGGCGAAAAGAAAATCCTAAATGGTGTGAGCTTCAAGATCAGACATGGTGAAGCTGTTGGAATAATTGGTCCTTCTGGGACCGGCAAATCTACTGTTTTGAAGATTATTGCAGGATTGCTTGCCCCAGACAAGGGTGAGGTTTATATTCGAGGTAGAAAGAGAGCAGGTTTGATAAGCGATGAGGAGATATCTGGTCTACGGATTGGATTAGTGTTCCAAAGTGCAGCCCTTTTTGATTCCTTGACTGTTCGTGAAAATGTCGGTTTTCTCTTGTATGAAAACTCTAGCATGTCTGAGGATCAAATTTCAGAGCTTGTCAAGGAAAGCTTGGCTGCTGTTGGATTAAAGGGCGTTGAGGATCGGCTACCTTCTGAGTTGTCAGGTGGTATGAAAAAACGAGTTGCCTTAGCTCGGTCTATCATTCATGACACTACAAACAATTCAATAGAACCAGAGGTACTCTTGTATGATGAACCAACTGCTGGGCTTGATCCTATAGCTTCTACTGTAGTTGAGGATCTGATACGCTCTGTCCACATAAAAGGACGTGATGCTGTAGGGAAACCTGGGAAGATTGCATCTTATGTGGTTGTCACTCACCAACATAGTACCATTAAAAGAGCTATTGATAGGTTGTTGTTTCTACACAAGGGTAAGATTGTCTGGGAAGGAATGACTCATGAATTTACGACATCAACAAATCCAATTGTTCAACAATTTGCATCTGGTAGTCTGGACGGGCCAATCAAATATTAG 1053 0.4207 MVSLFSVSLFPFTPQNALSPSTKFAPADASTTNSFCIKPRIEHRKVVCACVAPPRNFKSDESSAIKFNGSSKSEHLHTIRDPEDDSDVLIECRDVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSSMSEDQISELVKESLAAVGLKGVEDRLPSELSGGMKKRVALARSIIHDTTNNSIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGRDAVGKPGKIASYVVVTHQHSTIKRAIDRLLFLHKGKIVWEGMTHEFTTSTNPIVQQFASGSLDGPIKY 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g4041 350 Gene3D - 76 342 IPR027417 -
Sto13g4041 350 ProSitePatterns ABC transporters family signature. 225 239 IPR017871 GO:0005524
Sto13g4041 350 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 1 350 - -
Sto13g4041 350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 331 IPR027417 -
Sto13g4041 350 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 90 341 IPR003439 GO:0005524
Sto13g4041 350 SMART AAA_5 114 318 IPR003593 -
Sto13g4041 350 Pfam ABC transporter 105 260 IPR003439 GO:0005524
Sto13g4041 350 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 1 350 - -
Sto13g4041 350 CDD ABC_Org_Solvent_Resistant 90 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g4041 Sto-Chr13 41042585 41046214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g4041 96 334 Calmodulin-binding Proteins AT2G36910 27.092 1.48e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g4041 - - gmx:100789283 570.081