Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g4032 ATGTCGTTTGGAGGAGCCTCCcagAATAAGAAAAGCCAAAGCAAGAGGGAGCATGGTTGTGCAGCACACGAAAACGTAATTCCATCAACAACACCAGagataaagaaagagaaatcatcGGATATGGGAGGGCAAGTAGATCCGGCGAGTATTAAAGCGCAAAATTTCACATTCCGTGAGCTAGCAACGGCAACGAAGAATTTTCGGCAGGAATGCCTTTTGGGAGAAGGTAGCTTTGGGAGAGTTTACAAGGGGACGATTCCTGCGACGGGGCAGGTGGTAGCTGTGAAGCAACTAGACAGAAATGGAGTGCAGGGGAATAAGGAATTTCTGGTAGAGGTATTGAGGCTAAGTCTGTTACATCATGATAATCTGGTGAATCTGATCGGGTATTGCGCGGATGGAGATCAACGGCTTTTGGTGTATCAATTCGTGAATGGGGGTTCCCTAGAGCAACATCTTCTAGATCTTGGGTCGGAATCGGATAAGGCGCCATTGGATTGGTACGGAAGAATGAAAATAGCATCGAATGCTGCAAGAGGACTAGAGTATTTGCATGACTCAGCCAATCCCCCGGTCATATACCGAGACTTGAAACCCTCTAATATCTTGTTGGACCAACATCTGAATCCTAAACTATCTGATTTTGGACTGCTCAACATTGCTGGGCATGGGGGAGATAAGGCCACCTCTGCACCTTCGAGAGTGATGGGTACCTATGGGTACTCGGCTCCAGAGTATGTAAGAACAGGCCACCTCACACTGAAATCCGATGTGTACAGCTTTGGAGTCATCTTACTAGAGCTGATTACTGGACGAAGAGCCGTGGACACTAGAAGACCAAACCAGGAGCAAAACCTGGTGTCATGGGCCCAGCCCATATTCAAAGACCCAAAAAGATTTCCAGACATGGCAGATCCACTTCTAAAGAAGCGTTTCCCAGAGAAGGATCTGAATCAAGCAGTTGCAATAGCGGCGATGTGCCTGCAGGAGGAACCGGGAGCCCGTCCTTTGATGAGTGACGTAGTAACTGCTCTTAGTTTCCTTTCTGTGGCTCCTCCCCCGGACCAGGAGCAGCTTATGAGCAGCCACAGTAGTGAGAGTACTGAGAGTGAGAGCTAA 1122 0.475 MSFGGASQNKKSQSKREHGCAAHENVIPSTTPEIKKEKSSDMGGQVDPASIKAQNFTFRELATATKNFRQECLLGEGSFGRVYKGTIPATGQVVAVKQLDRNGVQGNKEFLVEVLRLSLLHHDNLVNLIGYCADGDQRLLVYQFVNGGSLEQHLLDLGSESDKAPLDWYGRMKIASNAARGLEYLHDSANPPVIYRDLKPSNILLDQHLNPKLSDFGLLNIAGHGGDKATSAPSRVMGTYGYSAPEYVRTGHLTLKSDVYSFGVILLELITGRRAVDTRRPNQEQNLVSWAQPIFKDPKRFPDMADPLLKKRFPEKDLNQAVAIAAMCLQEEPGARPLMSDVVTALSFLSVAPPPDQEQLMSSHSSESTESES 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g4032 373 MobiDBLite consensus disorder prediction 1 47 - -
Sto13g4032 373 Pfam Protein kinase domain 70 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g4032 373 Gene3D Transferase(Phosphotransferase) domain 1 145 363 - -
Sto13g4032 373 MobiDBLite consensus disorder prediction 356 373 - -
Sto13g4032 373 SMART serkin_6 68 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g4032 373 PANTHER OS07G0668900 PROTEIN 8 359 - -
Sto13g4032 373 SUPERFAMILY Protein kinase-like (PK-like) 51 350 IPR011009 -
Sto13g4032 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Sto13g4032 373 MobiDBLite consensus disorder prediction 353 373 - -
Sto13g4032 373 Gene3D Phosphorylase Kinase; domain 1 40 144 - -
Sto13g4032 373 PANTHER RECEPTOR-LIKE KINASE LIP1 8 359 - -
Sto13g4032 373 CDD STKc_IRAK 74 346 - -
Sto13g4032 373 ProSiteProfiles Protein kinase domain profile. 68 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g4032 373 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g4032 Sto-Chr13 40997093 40998378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g4032 50 353 Glycoside Hydrolase AT3G07070 73.026 3.53e-160 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Sto13g4032 Pkinase 9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g4032 - - lang:109335196 507.294