Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g4030 atggGGGGTGTTCCCTGgacaaaagaagaagacaatcTGCTTAAGAAATGCATACTCCAGTATGGGGAAGGAAACTGGCATCGCCTTCCTGTCTTGTCTGGTCTAAAGAGGTGCCGAAAAAGCTGTAGGCTAAGATGGTTGAACTACCTGCGTCCCAACATCAAAAGAGGGAGTTTTAGCCACGACGAAGGCCAGTTGATCCTCAAACTCCACAAACTGGTGGGCAAcagGTGGACGGTAATCGCAGGAAGGCTACCAGGAAGGACAGCCAACGACGTAAAGAACTATTGGAACTGTCATTTGACACAAGGACAAGTAGATAATACTAGTATCATTAGTGCAAGAATCAACCATACGTCCACGCCCATAACGTCGTCGTCTTATGCTGATCATCATCACCCCTTTGTTGACGACCTCCCGCTCCCGTTCATGGACTTGGAATTTCAACCACTTAAACCTACCAATCAATGCGATAATTGGGATGATTTCACTTTAGATTTGGATCTTATTTAA 513 0.4347 MGGVPWTKEEDNLLKKCILQYGEGNWHRLPVLSGLKRCRKSCRLRWLNYLRPNIKRGSFSHDEGQLILKLHKLVGNRWTVIAGRLPGRTANDVKNYWNCHLTQGQVDNTSIISARINHTSTPITSSSYADHHHPFVDDLPLPFMDLEFQPLKPTNQCDNWDDFTLDLDLI 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g4030 170 Gene3D - 4 55 - -
Sto13g4030 170 Pfam Myb-like DNA-binding domain 5 50 IPR001005 -
Sto13g4030 170 Pfam Myb-like DNA-binding domain 56 98 IPR001005 -
Sto13g4030 170 ProSiteProfiles Myb-like domain profile. 5 50 IPR001005 -
Sto13g4030 170 PANTHER MYB TRANSCRIPTION FACTOR 5 110 - -
Sto13g4030 170 SUPERFAMILY Homeodomain-like 4 97 IPR009057 -
Sto13g4030 170 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 105 IPR017930 -
Sto13g4030 170 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Sto13g4030 170 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 5 110 - -
Sto13g4030 170 Gene3D - 58 101 - -
Sto13g4030 170 SMART sant 2 52 IPR001005 -
Sto13g4030 170 SMART sant 55 103 IPR001005 -
Sto13g4030 170 CDD SANT 58 101 IPR001005 -
Sto13g4030 170 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 54 IPR017930 -
Sto13g4030 170 CDD SANT 5 50 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g4030 Sto-Chr13 40988111 40988955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g4030 6 134 MYB Transcription Factor Family AT1G66370 59.848 6.97e-51 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto13g4030 Myb_DNA-binding 1.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g4030 K09422 - zju:107434709 197.208