Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g4003 ATGAGGATTATGATAAAGGGTGGTGTTTGGAAAAACACCGAGGATGAAATCCTCAAAGCGGCTGTTATGAAGTATGGTAAGAACCAGTGGGCTCGAATCTCTTCGCTTCTCGTTCGCAAATCCGCCAAGCAATGTAAGGCTCGTTGGTACGAGTGGCTTGATCCTTCCATTAAAAAGACTGAGTGGACAAGAGAAGAGGATGAGAAACTTCTTCATCTTGCTAAGCTTATGCCCACACAATGGAGAACAATTGCTCCAATTGTAGGCCGTACACCTTCCCAATGCCTTGAACGGTATGAGAAGCTCCTTGATGCAGCCTGTGTAAAGGATGAGAACTATGAACCTGGTGATGACCCCCGGAAATTGCGTCCTGGAGAAATTGACCCAAACCCTGAATCAAAACCTGCACGACCAGATCCCGTTGATATGGATGAAGATGAGAAGGAAATGTTGTCTGAAGCACGAGCTAGGTTAGCCAACACTAAGGGTAAGAAGGCAAAACGAAAGGCCAGGGAGAAACAGCTAGAGGAAGCCAGGAGGCTTGcttctttacaaaaaaagagagaactAAAGGCTGCTGGAATTGATGTCAGGCAGCGGAGGAGGAAAAGGAAAGGAATAGACTATAATGCAGAAATCCCCTTTGAGAAAAGGCCTCCTCCGGGGTTTTTTGATGTTACAGATGAAGATAGAATAGTGGAACAGCCCATGTTCCCTACCACAATTGAAGAACTTGAGGGAAAAAGAAGAATTGATGTAGAAGCACAATTAAGAAAGCAAGACATTGCAAAGAATAAAATTGCACAAAGGCAAGATGCCCCCTCTGCTATACTGCATGCCAACAAGCTCAATGATCCAGAAACAGTTAGAAAAAGGTCAAAACTGATGCTTCCGCCACCCCAGATTTCTGATCATGAATTGGAAGAAATAGCAAAGATGGGGTATGCCAGTGACCTTGCAGGGAGTGAGGAACTTACAGAAGGTAGTGGTGCAACGCATGCTCTTCTGGCTAATTATGCACAGACCCCCAGCCAGGGAATGACTCCTTTACGAACTCCTCAGAGAACACCTGCTGGTAAAGGAGATGCTATCATGTTGGAAGCCGAAAATCTGGCCAGGTTGAGAGAGTCTCAGACACCATTGTTGGGAGGAGAGAACCCAGAGTTGCATCCATCTGATTTTTCTGGGGTCACTCCTAAGAAAAGGGAGATTCAGACTCCAAATCCTATGCTGACTCCCTCTGCAACCCCTGGAGGTGCTGGCCTCACACCTAGAAGTGGTATGACACCAGCAAGGGATGGCTTTTCTTTTGGAATGACTCCCAAGGGAACTCCTCTTAGAGATGAGCTTCATATCAACGAAGATATGGATATGCAAGAGAGTGCAAAACTAGAGCTACGTAGACAAGCTGATCTGAAAAGAAGCTTGCGCTCTGGTTTAAGCAGTCTTCCACAGCCCAAAAATGAGTACCAGATAGTTATGCAACCAGTTCCAGAAGatgttgaagaagctgaggagAAGATTGAAGAGGACATGTCTGACAGAATAGCTAGAGAAAAGGCAGAAGAAGAAGCGCGGCAGCAGGCTTTACTTAGAAAACGATCAAAGGTCCTTCAAAGGGAGCTTCCTAGGCCTCCTGCAGCATCGTTGGAACTGATAAGAAATTCTTTGCTTATTGCCGATGGGGATAAGAGTTCTTTTGTTCCTCCTACTTCCATCGAGCAAGCTGATGAGATGATAAGAAAGGAGCTTCTAAGCTTACTGGAACACGATAATGCTAAGTACCCACTTGATGAGAAAGTgaataaggagaaaaaaaaaggagtcaAACGTGCAGCAAATGGGTCTGTTGTTGTCCCTCAGATAGGAGATATTGAAGAAGATGAGATGAAAGATGCTGATCAATTGATAAAGGAGGAGGCTCAATATCTTCGTGTAGCAATGGGACATGAAAGTGAACTCCTTGATGAATTTGTTGAAGCGCATAGAACTTGCCTTAATGATCTTATGTACTTCCCCACCAGAAATGCTTATGGTCTCTCAAGTGTTGCTGGAAACATGGAGAAGCTTGCAGCTTTGCAGAATGAATTTGAGAATGCGAGGAACAAGTTGGATGATGGTAAGGAGAAGGCAGTGCGCCTTGAGAAGAAGGTTATAGTTCTCACACAAGGCTATGAGATGAGGGCAAAGAAAAGTCTTTGGCCACAAATTGAGGCCACCTTCAAGCAGATGGACACTGCTGCAACTGAACTAGAGTGCTTCCAAGTTTTGCAAAAGCAGGAGCATCTAGCCGCATCCCACCGAATAAACAACCTTTGGGCTGAAGTAGAGAAGCAAAAGGAACTTGAGAAAACCTTACAAAAAAGATATGGGGATCTTCTGGCAGAGCTGGAGAGGATTCAAAATGTCATGAACCAATACAGGGTAAAAGCACAAGAGCAAGAAGAAATAGCTGAAAAGAATGATGCTCTCGAGTTAGCTGAGACTGCATCTGATGAGAACAACGTGGAGGGTACAGAAAATAAGAAAGATGTAGCTCACTCAGATGAGCAAGGAAATGCTATGTTAGTTAACTCCACCCATGATGAAACTGCTGACCAGCAAGTAGATGAGGTGCAAGAGAGGGCCACTCCAAGCCCCAAAAATGCAATGGATGTGGATGCTGATAAAGAGCAAATGACACACAAAACTGATGTCGAATTACAAGTTGCTATGGCTGATGCAGCAACGGTACCAGGTAACAGCACGAACAGTGATATTCCTTCCAAAGAGACGTCTCTAGATACGGGTGATGCAGAGGAGATGACAAGTATTGAGGATCAGGATGCTAAGAATCCAGAGAATGTTGTGGAAGCCATAAACTCacatgattaa 2874 0.4367 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDVRQRRRKRKGIDYNAEIPFEKRPPPGFFDVTDEDRIVEQPMFPTTIEELEGKRRIDVEAQLRKQDIAKNKIAQRQDAPSAILHANKLNDPETVRKRSKLMLPPPQISDHELEEIAKMGYASDLAGSEELTEGSGATHALLANYAQTPSQGMTPLRTPQRTPAGKGDAIMLEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKREIQTPNPMLTPSATPGGAGLTPRSGMTPARDGFSFGMTPKGTPLRDELHINEDMDMQESAKLELRRQADLKRSLRSGLSSLPQPKNEYQIVMQPVPEDVEEAEEKIEEDMSDRIAREKAEEEARQQALLRKRSKVLQRELPRPPAASLELIRNSLLIADGDKSSFVPPTSIEQADEMIRKELLSLLEHDNAKYPLDEKVNKEKKKGVKRAANGSVVVPQIGDIEEDEMKDADQLIKEEAQYLRVAMGHESELLDEFVEAHRTCLNDLMYFPTRNAYGLSSVAGNMEKLAALQNEFENARNKLDDGKEKAVRLEKKVIVLTQGYEMRAKKSLWPQIEATFKQMDTAATELECFQVLQKQEHLAASHRINNLWAEVEKQKELEKTLQKRYGDLLAELERIQNVMNQYRVKAQEQEEIAEKNDALELAETASDENNVEGTENKKDVAHSDEQGNAMLVNSTHDETADQQVDEVQERATPSPKNAMDVDADKEQMTHKTDVELQVAMADAATVPGNSTNSDIPSKETSLDTGDAEEMTSIEDQDAKNPENVVEAINSHD 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g4003 957 MobiDBLite consensus disorder prediction 399 413 - -
Sto13g4003 957 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 839 - -
Sto13g4003 957 MobiDBLite consensus disorder prediction 910 925 - -
Sto13g4003 957 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Sto13g4003 957 Coils Coil 797 830 - -
Sto13g4003 957 Coils Coil 167 187 - -
Sto13g4003 957 SMART sant 6 55 IPR001005 -
Sto13g4003 957 SMART sant 58 105 IPR001005 -
Sto13g4003 957 MobiDBLite consensus disorder prediction 113 150 - -
Sto13g4003 957 MobiDBLite consensus disorder prediction 835 849 - -
Sto13g4003 957 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Sto13g4003 957 PANTHER - 1 839 - -
Sto13g4003 957 Pfam pre-mRNA splicing factor component 406 653 IPR021786 -
Sto13g4003 957 CDD SANT 10 53 IPR001005 -
Sto13g4003 957 Gene3D - 60 114 - -
Sto13g4003 957 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Sto13g4003 957 CDD SANT_CDC5_II 55 106 - -
Sto13g4003 957 Coils Coil 683 717 - -
Sto13g4003 957 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Sto13g4003 957 MobiDBLite consensus disorder prediction 910 957 - -
Sto13g4003 957 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Sto13g4003 957 MobiDBLite consensus disorder prediction 864 893 - -
Sto13g4003 957 Pfam Myb-like DNA-binding domain 10 70 - -
Sto13g4003 957 MobiDBLite consensus disorder prediction 380 423 - -
Sto13g4003 957 Gene3D - 5 59 - -
Sto13g4003 957 MobiDBLite consensus disorder prediction 826 850 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g4003 Sto-Chr13 40811359 40815735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g4003 1 833 MYB-Related Transcription Factor Family AT1G09770 76.647 0.0 1248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto13g4003 Myb_Cef 2.6e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g4003 K12860 - gmx:100801352 1476.84