Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3993 atgataattcCATGTCTCTATCTGCAGGGGACTCCTGTGAATATTATTGTGGGTTCTCATGTCTGGATTGAGGACCCAGATGTATCTTGGATTGATGGAGTGGTATCAAAAATCAATGGAACGGATGCAGAAATTGAAACTAGCAATGGAAAAAAGGTTACTGcaaaattatcaaaaatataTCCCAAAGATACGGAGGCTCCTGCTGGTGGAGTGGATGATATGACTAAGCTGTCGTATTTGCATGAGCCTGGAGTCCTGCAGAATTTAAAAACTAGATATGAATTGAATGAAATATATACTTATACTGGAAATATTTTAATTGCGATAAATCCATTCCAAAGACTACCTCATATTTATGACGCTCACATGATGCAACAATACAAGGGAGCACCATTTGGAGAATTAAGCCCTCATGTTTTTGCAGTTGCTGATGTTGCATTTAGGGCAATGGTTAACGAAGGAAAAAGCAATTCAATTCTGGTCAGTGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTTATGCGATACCTTGCTTATTTAGGTGGCAGGGCTGCTACTGAAGGACGAACAGTTGAGCAACAAGTTCTAGAGTCAAATCCAGTTCTTGAAGCATTTGGCAATGCAAAAACGGTTAGGAATAACAACTCCAGCCGTTTCGGAAAATTTGTTGAGATCCAGTTTGATAAGAGTGGAAGAATCTCAGGAGCGGCCATCCGAACTTACCTTTTGGAGAGGTCTCGGGTTTGCCAAATTAATGATCCTGAACGCAACTACCACTGTTTCTACCTTCTTTGTGCTGCACCACAGGAGGAAATTGAGAAATACAAATTAGATCATCCTAAAACATTTCATTACCTTAACCAGTCAAATTGTTTTGAACTGGCTGATTCAAGTGATGCTCGAGAGTATCTTGCCACCAGGAGGGCTATGGATATTGTTGGAATAAGCCAAAAAGAGCAGGAAGCAATTTTCAGAGTTGTTGCTGCAATTCTCCATCTTGGTAATATTGTTTTTTCCAAAGGAAAAGAAGTTGACTCATCAGTTCCCAAAGATGACAAAGCCAAATTCCACCTGAAAACAACTGCTGAGCTTCTCATgTGCGATGCTAATACCTTGGAAGATGCattatgcaagcgtgtgatggTCACGCCTGAAGAAGTTATAAAGCGGAGCCTTGATCCCCAAAGTGCAGCAATCAGTAGAGATGGCTTGGCGAAAACAGTTTATTCTCGGCTATTTGACTGGTTGGTTGACAAGATTAACAGTTCAATCGGACAAGATCCCAATTCCAAAACTTTGATTGGACACGTGTTTAAAATGGAACAAGAAGAATATACAAAGGAGCAGATTGATTGGAGCTACATTGAATTTGTTGATAATCAAGATGTTCTCGACCTTATTGAAAAGAAACCTGGAGGAATCATTGCTCTCCTTGATGAAGCTtgCATGTTTCCAAAGTCAACACATGAAACATTTGCAAACAAGCTGTATCAAACATTTAAGAATCACAAGCGCTTTATAAAGCCAAAATTGTCACGAACAGATTTCACCATTGGTCACTATGCTGGGGAGGTCTTATACCAGTCTCATCAATTTTTAGACAAAAACAAGGATTATGTGGTTCCAGAACATCAAGATTTGTTGAATGCTTCCAAATGTTCTTTTGTGTCAGGACTTTTTCCTCCACTTCCGGAAGAGACATCTAAATCATCCAAATTTTCTTCAATTGGTTCTCGTTTTAAGCTACAACTACAGTCACTAATGGAAACACTTAACTCTACGGAGCCTCATTATGTTAGATGTGTGAAACCAAACAACCTCCTCAAGCCTGCAATTTTTGAGAATGCTAACGTTATGCAACAGCTTCGATGTGGTGGTGTTTTAGAGGCAATAAGAATCAGTTGTGCTGGCTACCCTACTCGCCGCCTTTTCTATGAATTTACAAACAGATTTGGCATCCTTGCCCCGGAGGCCATGGAGGGACACTATGAAGATAAGGTTGTTTGCCAAAAGATTCTGGAAAAGGTTGGGCTAAAAGGATATCAGATTGGAAAAACGAAGATATTCCTGAGAGCAGGTCAGATGGCTGACCTAGATGCACGGAGAGCTCAAGTACTCAGTAGTGCGGCAAAAACTATCCAACGGCGTATACGAACCCATCAAGCTCGCAAACATTATCTTGCTTTGCGAATGACTACCATATGCTTGCAGTCTTTGTGTAGAGGGAGACTGGCATGCAAACTCTTTGACAAAATGAGAAAGGTGGCTGCTGCTAAGAAAATCCAGAAGAACATACGCCGATATCAAGCCAGAAAAGCCTATAAAAAACTTCAAGCTTCAGTACTTACCTTGCAAACAGCTTTAAGGGCGATTGCTGCACGCAAGGAGTTCAGATTTAGGAAGCAGACTAAAGCTGCCATCATTATCCAGGCTCGATGGCGATGCCACAGAGCTTCCTCATATTACAAGAGGCTAAAAAAAGGTACAATAACTACACAATGCCGATGGAGAGGCCGCGTAGCTAGGAGAGAACTTAGGAAGCTAAAAATGGCTGCAAGAGAAACGGGTGCACTTCAAGAAGCAAAGGATAAGCTTGAAAAAAGAGTGGAGGAACTCACTTGGCGTCTCCAACTAGAAAAAAGTTTAAGGACCAACCTTGAAGAAGCCAAAGCACAAGAGGTAGCAAAACTGCAGAACTCATTGAAGGAGATGCAGAACAAAGTTGATGAAACCAATGCTTTGCTTGTCAAAGAGCGAGAGAATGTAAAGAAAGTTGTTGAAGAAGCACCTCCTGTTATTCAGGAAACTCAGGTTGTTGTTGAAGACACAGAAAAAGTTGAATCACTGACAGCGGAAGTGGAGAGCCTAAAGACTTCACTCGAGTCAGAAAAACAGAAAACAGATGacttggaaaaaaaatacaGTGAAGCCCAAGTTTGTAGTGAAGAAAGGGGCAAAAAATTAGAAGACTCAGAGAAGAAGGTTCGTCAGCTTCAGGAATCATTGACCAGGCTAGAAGAAAAGATCACTAATTTAGAATCCGAGAATCAAGTTCTACGTCAACAAGCTGTGTCCATGGCACCTAATAAGTTCCTTTCAGGACGGTCTAGGTCTATTATTCAGAGAGGTGCTGAAAGTGGTCATATTGGAGGGGAACCGAAGACACATTTGGATCTGCATAGCCCATCAATGAACCAGAGGGAACACTCTGAAGTGGAGGATAAACCACAAAAATCACTAAATGAGAAACAGCAGGAGAATCAAGACTTGCTGATTAGATGTGTTGCGCAACATCTAGGGTTTGGTGGGAACAGGCCAATTGCTGCTTGTATCATATACAAATGCCTCTTGCATTGGCGATCATTTGAAGTAGAGCGTACTAGCGTTTTTGATCGTATTATTCAAACTATTGGGCATGCAATCGAGACCCAGGATAACAATGATATCTTGGCTTATTGGTTATCCAATGCCTCTACACTTCTCTTGCTTCTCCAGCGCACACTTAAGGCAAGTGGTGCTGCTGGAATGGCTCCCCAACGCCGACGTTCTCAATCAGCAACCCTATTTGGGAGGATGACACAaAGTTTCCGTGGAACTCCAGCAGGAGTCAATCTTTCCCTCATCAACGGCAGCGGTGGAGTAGATACGTTAAGACAGGTTGAAGCCAAGTACCCAGCCCTGCTTTTCAAACAGCAGCTTACAGCATATGTGGAAAAGATATATGGAATGATTCGAGATAACTTGAGGAAAGAAATTTCTCCCTTGCTTGGATTATGCATCCAGGCACCTAGAACATCCAGAGCAAGCTTGGTTAAAGGAGCACGCTCCGTTGCAAACACTGAAGCTCAGCGGGCTTTGATTGCTCACTGGCAGGGGATAGTTAAGAGCCTTACCAACTTTTTGAATACATTAAAAGCAAATCATGTTCCTCCATTTTTAGTTCGTAAAGTGTTCACacaaattttttctttcatcaACGTCCAACTATTCAACAGTCTTCTTTTAAGACGGGAGTGCTGCTCATTCAGCAATGGGGAATACGTCAAAGCTGGTTTGGCTGAATTGGAGCACTGGTGTTATAAGGCAACAGATGAGtATGCAGGTTCGGCATGGGATGAGCTTAAACATATTAGACAGGCTATTGGATTTCTGGTCATACATCAGAAACCAAAGAAAACGTTGGATGAAATAAGTCATGACCTGTGCCCAGTCCTCAGTATACAGCAGCTATATCGGATTGGCACCATGTACTGGGATGACAAGTATGGCACACATAGCGTGTCCCCTGATGTCATATCCAGCATGAGAGTGTTGATGACCGAAGATTCAAATAATGCAGTTAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCATTTTCTGTTGATGACATATCAAAGTCGATGGAGCAAATAGATATCTCCGATATCGAGCCCCCACCACTTATTCGCGAGAACTCTGGCTTTAGTTTCTTGTTGCCACGTATAGATTGA 4509 0.4127 MIIPCLYLQGTPVNIIVGSHVWIEDPDVSWIDGVVSKINGTDAEIETSNGKKVTAKLSKIYPKDTEAPAGGVDDMTKLSYLHEPGVLQNLKTRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYKGAPFGELSPHVFAVADVAFRAMVNEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCAAPQEEIEKYKLDHPKTFHYLNQSNCFELADSSDAREYLATRRAMDIVGISQKEQEAIFRVVAAILHLGNIVFSKGKEVDSSVPKDDKAKFHLKTTAELLMCDANTLEDALCKRVMVTPEEVIKRSLDPQSAAISRDGLAKTVYSRLFDWLVDKINSSIGQDPNSKTLIGHVFKMEQEEYTKEQIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKNHKRFIKPKLSRTDFTIGHYAGEVLYQSHQFLDKNKDYVVPEHQDLLNASKCSFVSGLFPPLPEETSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYVRCVKPNNLLKPAIFENANVMQQLRCGGVLEAIRISCAGYPTRRLFYEFTNRFGILAPEAMEGHYEDKVVCQKILEKVGLKGYQIGKTKIFLRAGQMADLDARRAQVLSSAAKTIQRRIRTHQARKHYLALRMTTICLQSLCRGRLACKLFDKMRKVAAAKKIQKNIRRYQARKAYKKLQASVLTLQTALRAIAARKEFRFRKQTKAAIIIQARWRCHRASSYYKRLKKGTITTQCRWRGRVARRELRKLKMAARETGALQEAKDKLEKRVEELTWRLQLEKSLRTNLEEAKAQEVAKLQNSLKEMQNKVDETNALLVKERENVKKVVEEAPPVIQETQVVVEDTEKVESLTAEVESLKTSLESEKQKTDDLEKKYSEAQVCSEERGKKLEDSEKKVRQLQESLTRLEEKITNLESENQVLRQQAVSMAPNKFLSGRSRSIIQRGAESGHIGGEPKTHLDLHSPSMNQREHSEVEDKPQKSLNEKQQENQDLLIRCVAQHLGFGGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNDILAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSQSATLFGRMTQSFRGTPAGVNLSLINGSGGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLRKEISPLLGLCIQAPRTSRASLVKGARSVANTEAQRALIAHWQGIVKSLTNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRIGTMYWDDKYGTHSVSPDVISSMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDISDIEPPPLIRENSGFSFLLPRID 1502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3993 1502 Coils Coil 852 886 - -
Sto13g3993 1502 MobiDBLite consensus disorder prediction 1049 1087 - -
Sto13g3993 1502 Gene3D Kinesin motor domain 20 302 IPR036961 -
Sto13g3993 1502 Gene3D Kinesin motor domain 570 641 IPR036961 -
Sto13g3993 1502 Pfam Myosin head (motor domain) 72 439 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto13g3993 1502 ProSiteProfiles IQ motif profile. 710 737 IPR000048 GO:0005515
Sto13g3993 1502 SMART DIL_2 1320 1427 IPR002710 -
Sto13g3993 1502 Gene3D - 642 708 - -
Sto13g3993 1502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 758 858 IPR027417 -
Sto13g3993 1502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 760 IPR027417 -
Sto13g3993 1502 Pfam Myosin N-terminal SH3-like domain 17 59 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sto13g3993 1502 ProSiteProfiles IQ motif profile. 781 810 IPR000048 GO:0005515
Sto13g3993 1502 PANTHER MYOSIN-9 440 1499 - -
Sto13g3993 1502 PANTHER MYOSIN-9 13 439 - -
Sto13g3993 1502 Coils Coil 891 925 - -
Sto13g3993 1502 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 16 65 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sto13g3993 1502 MobiDBLite consensus disorder prediction 1053 1086 - -
Sto13g3993 1502 ProSiteProfiles IQ motif profile. 829 858 IPR000048 GO:0005515
Sto13g3993 1502 Pfam IQ calmodulin-binding motif 807 827 IPR000048 GO:0005515
Sto13g3993 1502 Pfam IQ calmodulin-binding motif 831 850 IPR000048 GO:0005515
Sto13g3993 1502 Pfam IQ calmodulin-binding motif 712 730 IPR000048 GO:0005515
Sto13g3993 1502 Pfam IQ calmodulin-binding motif 760 779 IPR000048 GO:0005515
Sto13g3993 1502 Gene3D - 437 567 - -
Sto13g3993 1502 PRINTS Myosin heavy chain signature 100 119 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto13g3993 1502 PRINTS Myosin heavy chain signature 157 182 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto13g3993 1502 PRINTS Myosin heavy chain signature 204 231 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto13g3993 1502 PRINTS Myosin heavy chain signature 457 485 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto13g3993 1502 PANTHER MYOSIN 13 439 - -
Sto13g3993 1502 PANTHER MYOSIN 440 1499 - -
Sto13g3993 1502 Coils Coil 992 1026 - -
Sto13g3993 1502 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Sto13g3993 1502 CDD MyosinXI_CBD 1086 1468 IPR037975 GO:0007015
Sto13g3993 1502 Coils Coil 950 977 - -
Sto13g3993 1502 Gene3D Myosin VI head, motor domain, U50 subdomain 318 436 - -
Sto13g3993 1502 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Sto13g3993 1502 SMART MYSc_2a 64 708 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto13g3993 1502 Gene3D - 709 760 - -
Sto13g3993 1502 Gene3D - 761 807 - -
Sto13g3993 1502 Gene3D - 808 857 - -
Sto13g3993 1502 Pfam DIL domain 1321 1424 IPR002710 -
Sto13g3993 1502 SMART iq_5 732 754 IPR000048 GO:0005515
Sto13g3993 1502 SMART iq_5 757 779 IPR000048 GO:0005515
Sto13g3993 1502 SMART iq_5 805 827 IPR000048 GO:0005515
Sto13g3993 1502 SMART iq_5 709 731 IPR000048 GO:0005515
Sto13g3993 1502 SMART iq_5 828 850 IPR000048 GO:0005515
Sto13g3993 1502 SMART iq_5 780 802 IPR000048 GO:0005515
Sto13g3993 1502 ProSiteProfiles Myosin motor domain profile. 70 707 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto13g3993 1502 CDD MYSc_Myo11 84 695 IPR036018 -
Sto13g3993 1502 ProSiteProfiles Dilute domain profile. 1135 1445 IPR002710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3993 Sto-Chr13 40735282 40746017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3993 10 1502 Myosins gene family AT1G54560 81.991 0.0 2632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3993 K10357 - gmx:100816792 2620.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3993 13 40735282 40746017 Sto13g3351 13 36902305 36916991 CCT
Sto13g3993 13 40735282 40746017 Sto13g3993 13 40735282 40746017 ECH