Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3955 ATGGATCAATCAACTCCGTGTGATCTAGTGTTCACAGTGAGGAGGAGGCAACCAGAACTAGTGGCCCCAGCTAAGCCTACTCCTCGTGAATTGAAACTACTCTCCGACATAGATGACCAAGACGGCTTCCGTTTTCAAATTCCACTCATTCACTTTTACCCTTCCCAGGCTTCGATGGCGGGCAAGGACCCCGCTCACACCATCAAAACCGCACTTGCTCAGACCTTAGTGTATTACTACCCATTGGCAGGTCGACTCCGTGAAGCTCCTGCCCGCAAACTCCTTGTGGATTGTAGTGCACAAGGTGTACTATTCGTTGAGGCCGATGCTGATGTCACACTTGCTCAATTCGGCCATCTTCAACCTCCATTTCCATGCTTCCAACAACTCCTTTATAAACTCCCTGGCTCTGAAGGAATCATTAATTGCCCCCTCCTACATATACAGGTTACACGCCTCAAGTGCGGAGGTTTCATCTTTGCCGTGAACGTGAACCACACCATGTGTGACGCTCCAGGATTTGTCCAATTCCTTGAGGCCTTAGCCGAGATTGCTCGCGGTGCTTCTCAGCCTTCTATTCTACCAGTGTGGCGTAGGGAAGTCCTAAATGCGAGAGACCCACCCCGTGTCACGTGCACTCATTACGAATACGAGCAGGTAGCAGTGccaagtgatgatgatgattcagAAGACACGGTCCAACGCTCTTTTTTCTTTGGGCCCACCGAGGTAGCAGCCATCCGTCAGTTGGTTCCGCATCACCTTCGTCATCAATGCACAAAGTTTGAGCTCCTCACGGCATTCCTCTGGCGTTGCCGCACCATAGCCTTGCAACTGCAACCGAACGACGACGTTCGGTTTATGTGTATTATGAATGCGCGAGGGAAAACCAAGGGTGGTTTGGAGATACCGGAGGGATACTATGGGAACGCCTTTGTATACCCGGCTGCTGTAACCAGTGCAGGAAAGTTGTGTGAGAGGCCTTTGGGGTATGCATTGGAGTTAGTGAGGAAAGCAAAGGGTATGGTGAGTGAAGAGTATGTACATTCTGTGATAGACCTAATGGTAATCAAAGGACGGCCATGTTATACAACAGCAAGATCCTGGCTTGTATCAGATTTAACGCATTTTGGATTTGGAGATGTTGATTTTGGATGGGGTAAGGCTGTGTATGGTGGGCCAGCTAATGCTGGGCTTGGTTCAAATCCAGGAGTGAGCTTTTATGTTGCAACTATCAACGCTAAAGGAGAAGAAGGCATAGTCGTACCAATCCGCTTGCCTTCCAAAGCTATGAAAAGGTTCGCAAAAGAGTTGGATGACGTCGTTAAAATATGTAACAATAATCAAGGTTCTACAGTTATTAACTCATCCCTGTAG 1377 0.4779 MDQSTPCDLVFTVRRRQPELVAPAKPTPRELKLLSDIDDQDGFRFQIPLIHFYPSQASMAGKDPAHTIKTALAQTLVYYYPLAGRLREAPARKLLVDCSAQGVLFVEADADVTLAQFGHLQPPFPCFQQLLYKLPGSEGIINCPLLHIQVTRLKCGGFIFAVNVNHTMCDAPGFVQFLEALAEIARGASQPSILPVWRREVLNARDPPRVTCTHYEYEQVAVPSDDDDSEDTVQRSFFFGPTEVAAIRQLVPHHLRHQCTKFELLTAFLWRCRTIALQLQPNDDVRFMCIMNARGKTKGGLEIPEGYYGNAFVYPAAVTSAGKLCERPLGYALELVRKAKGMVSEEYVHSVIDLMVIKGRPCYTTARSWLVSDLTHFGFGDVDFGWGKAVYGGPANAGLGSNPGVSFYVATINAKGEEGIVVPIRLPSKAMKRFAKELDDVVKICNNNQGSTVINSSL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3955 458 Gene3D - 9 215 IPR023213 -
Sto13g3955 458 Gene3D - 216 438 IPR023213 -
Sto13g3955 458 Pfam Transferase family 13 438 - -
Sto13g3955 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 444 - -
Sto13g3955 458 PANTHER ALCOHOL ACYLTRANSFERASE 11 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3955 Sto-Chr13 40504245 40533751 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3955 13 441 Monolignol Biosynthesis Gene Families AT5G48930 28.315 7.06e-45 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3955 K19861 - gmx:100797017 585.104