Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3949 ATGGACGGGCACAATGTATGTGTTTTAGCTTATGGACAGACAGGAACTGGCAAGACATTCACGATGAATGGAACAAACGAGCAGGCAGGAATAATTCCTCGTGCGCTTGAAGAGCTCTTTCGTCAAGCCTCTCTAGAGAAGTCATCTTCTTTTACGTTTTCAATAAGCATGTTGGAAGTTTACATGGGTAGTCTCAGGGATCTGCTGGCTCCAAGGCCGTCTGGTAGAGCGTATGAACCTGTGACAAAATGCAATCTCAACATTCAAACAGATCCAAAGGGATTGGTGGAAATTGAGGGTCTGTCAGAAGTGCAAATCTCAGATTGTGCTAAAGCCAAATGGTGGTACAACAAGGGTAGGAGAGCCAGATCCACTTCATGGACTAATGTGAATGAGGCATCAAGCAGGTCACACTGCTTGACGAGGATCACCATATTCCGTCGTGGATATGCCTTGGAAGCCAAAAGGGAAATAAGTAAGTTGTGGATGGTTGATCTTGGAGGCAGTGAGCGGTTACTGAAAACTGGAGCCATAGGACTAACACTTGATGAAGGCCGAGCCATTAATCTTTCTCTGTCAGCTTTAGCTGATGTCATTGCAGCTTTGAGGAGGAAGAGGTGTCATGTGCCTTACAGAAATAGCAAGCTAACTCAAATACTCAAAGATTCTTTAGGTGATGGTTCGAAGGTCCTGATGCTTGTGCACATAAGCCCTTCTGAAGAAGATGTTTGTGAGACAATATGTTCTTTAAACTTCGCAAAGAGAGCAAGAGCGACGGAGTCCAACAAAGAAATACCAGTGGAATTGAAGAGGCTAAAGGAGAAGAAGATCATAGAGCTTGAGGAAGAGATGAGGGAAGCTGAAATGGACAATGGGAATTTAAGGGATCAAATTCAGAAGGTCGAGCTGAAGTTAGATGAGCAAAAAAAGATATTCTCGAACGCATATAAGATTGTGGAAAATGATTGTAGCCCAATAAACCCCAAAAATGATGTGAAAGAGGCCATCGAAACCCCGAATGCATCAAAGAAGtgtattaaaaagaaattattaaattcTGTGCCTCGATTCATGACTTCAACTGTTGCTAGTCGACAAAGGCAAAGTGCTGCGGAAAGAGAAATTGTGGGAAGATCAAGAAGTTTAAGATCAGTGGTCACTAGAAGTTCTATGCAGTTTTCAGCTTCCCAATCACTTAGTTGCTCGGATCTCCGCCTGAAAGCAATACTACAAAGTTCAACTGGGAAATCTCGACTTGGTGAAACAAATATTGATGTCACAGTCGCAGAGAGTCCTAAATGCAATGGCTTGGAATCAAAAACCACCAATCCAAACTCGAGACTTGCATTATGTCGTCATAGAAGAAGAATGTCCGATCTGGTCTGA 1386 0.4257 MDGHNVCVLAYGQTGTGKTFTMNGTNEQAGIIPRALEELFRQASLEKSSSFTFSISMLEVYMGSLRDLLAPRPSGRAYEPVTKCNLNIQTDPKGLVEIEGLSEVQISDCAKAKWWYNKGRRARSTSWTNVNEASSRSHCLTRITIFRRGYALEAKREISKLWMVDLGGSERLLKTGAIGLTLDEGRAINLSLSALADVIAALRRKRCHVPYRNSKLTQILKDSLGDGSKVLMLVHISPSEEDVCETICSLNFAKRARATESNKEIPVELKRLKEKKIIELEEEMREAEMDNGNLRDQIQKVELKLDEQKKIFSNAYKIVENDCSPINPKNDVKEAIETPNASKKCIKKKLLNSVPRFMTSTVASRQRQSAAEREIVGRSRSLRSVVTRSSMQFSASQSLSCSDLRLKAILQSSTGKSRLGETNIDVTVAESPKCNGLESKTTNPNSRLALCRHRRRMSDLV 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3949 461 ProSiteProfiles Kinesin motor domain profile. 1 259 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto13g3949 461 Coils Coil 270 311 - -
Sto13g3949 461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 296 IPR027417 -
Sto13g3949 461 PANTHER KINESIN-LIKE PROTEIN KIN-14D ISOFORM X1 1 421 - -
Sto13g3949 461 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 421 - -
Sto13g3949 461 Gene3D Kinesin motor domain 1 303 IPR036961 -
Sto13g3949 461 SMART kinesin_4 1 267 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto13g3949 461 PRINTS Kinesin heavy chain signature 3 24 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto13g3949 461 PRINTS Kinesin heavy chain signature 128 145 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto13g3949 461 PRINTS Kinesin heavy chain signature 160 178 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto13g3949 461 PRINTS Kinesin heavy chain signature 209 230 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto13g3949 461 Pfam Kinesin motor domain 1 258 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3949 Sto-Chr13 40460310 40462544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3949 1 257 Calmodulin-binding Proteins AT5G65930 42.857 2.42e-56 200
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3949 13 40460310 40462544 Sto13g3949 13 40460310 40462544 ECH