Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3942 ATGGCTTTTGATTTAAGTTCCGTTTTTCCCAAATTGCAAATGCTAGCCACTTCTGATCATTCTTCAGTGGTCTCCATGAACCTATTTGTAGCACTCCTATGTGCTTGTATTGTCATTGGCCATCTTCTTGAGGAGAATCGGTGGATGAATGAATCCATTACAGCCCTTTTGATTGGTCTTTGCACTGGCGTAGTCATTTTGCTGTTAAGTGGCGGTAAAAGCTCGCATCTTCTTGTTTTCAGTGAAGATCTTTTCTTTATATACCTTCTCCCACCTATCATATTTAACGCTGGGTTTCAGGTAAAAAAGAAGCAgttttttgttaatttcattACCATCGTCCTGTTTGGAGCTGTTGGTACATTAATATCTTGTGCCATCATAACTCTTGGCGTTACGCAAATTTTTGGAAGGATGAATATTGGTCCCCTGGAAATAGGGGATTATCTAGCAATTGGTGCTATATTTGCTGCCACAGATTCCGTGTGCACATTGCAGGTGCTAAATCAGGATGAGACACCTTTACTATACAGTCTTGTGTTTGGGGAGGGTGTCGTGAATGATGCTACCTCCGTTGTACTTTTCAACGCAATCCAAAGTTTTGATCTCAACCACATTGACTCTGGAATCGCTCTACATTTTCTTGGCAACTTCTTGTATCTGTTTATTGCAAGCACACTGCTCGGGGTTTTGACTGGTCTGCTTAGTGCATTCATTATCAAAAAGCTCTATATTGGCAGGCACTCCACAGATCGTGAAGTTGCTCTTATGATGCTAATGGCATACCTTTCCTACATGATGGCTGAATTATGCTATCTGAGTGGCATTCTGACCGTATTCTTTTGTGGGATTGTGATGTCTCATTATACTTGGCATAATGTGACTGAAAGTTCAAGAGTAACTACCAAGCATGCTTTTGCAACCTTATCATTTGTTGCCGAGACATTTATCTTCCTCTATGTTGGTATAGATGCCTTGGACATTGAGAAATGGACGTTTGTTAGTGATAGCCCTGGAAAATCAGTAGCAGTGAGTTCTGTATTGCTGGGTCTAGTACTCGCTGGAAGAGCAGCTTTTGTTTTCCCTTTATCCTTCTTATCCAACTTGGCTAAAAAGTCGCCGAATGAGAAAATCAACTTGAGGCAGCAAGTGATCATTTGGTGGGCTGGTCTTATGAGGGGATCTGTTTCCATGGCACTTGCATATAATCAGTTCACCATGTCGGGGCATACTCAACTGCGGTCCAATGCATTCATGATCACCAGCACAATCACAGTTGTGCTTTTCAGCACAGTGGTGTTTGGATTAATGACTAAGCCACTCATAAGGTATTTGCTACCTCATGCTAAAAACTCAAGCAGCGCAACAACAGAATCATCTACACCAAAATCATTTTTCACTGTGCCACTTCTTGGAGGTTCTCAAGATTCTGAAGCTGATATTGATGGACAAATTATTCGACCCAGCAGCATTCGTTTATTACTAACCACTCCAACGCACACAGTTCATCGATACTGGCGTAAGTTTGATGATGCATTCATGCGTCCAGTTTTTGGAGGCAGGGGTTTCGTTCCTGTAGAGCCTGGCTCACCAACCGAACGAAATGGTCAACAGTGGCATTGA 1623 0.419 MAFDLSSVFPKLQMLATSDHSSVVSMNLFVALLCACIVIGHLLEENRWMNESITALLIGLCTGVVILLLSGGKSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIVLFGAVGTLISCAIITLGVTQIFGRMNIGPLEIGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLNHIDSGIALHFLGNFLYLFIASTLLGVLTGLLSAFIIKKLYIGRHSTDREVALMMLMAYLSYMMAELCYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAETFIFLYVGIDALDIEKWTFVSDSPGKSVAVSSVLLGLVLAGRAAFVFPLSFLSNLAKKSPNEKINLRQQVIIWWAGLMRGSVSMALAYNQFTMSGHTQLRSNAFMITSTITVVLFSTVVFGLMTKPLIRYLLPHAKNSSSATTESSTPKSFFTVPLLGGSQDSEADIDGQIIRPSSIRLLLTTPTHTVHRYWRKFDDAFMRPVFGGRGFVPVEPGSPTERNGQQWH 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3942 540 PANTHER SODIUM/HYDROGEN EXCHANGER 7 539 IPR018422 GO:0006812|GO:0015299|GO:0016021
Sto13g3942 540 PANTHER SODIUM/HYDROGEN EXCHANGER 2 7 539 - -
Sto13g3942 540 Pfam Sodium/hydrogen exchanger family 30 442 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Sto13g3942 540 Gene3D - 146 197 - -
Sto13g3942 540 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 24 467 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Sto13g3942 540 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Sto13g3942 540 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Sto13g3942 540 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Sto13g3942 540 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3942 Sto-Chr13 40399733 40403039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3942 6 538 Antiporters AT3G05030 76.252 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3942 - - gmx:100816746 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3942 13 40399733 40403039 Sto13g3942 13 40399733 40403039 CCT