Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3932 ATGGAGTGCAACAAGGATGAGGCTTTGAGGGCTAAGAAAATTGCAGAAAGTAAATTGCAAGTTGGTGATTTTGTAGGGGCACTGAAGTTTGCTGTGAAGGCCCAAAAACTTTTTCCTGAAGTTGAAAACATTGTTCATATCCTTACAGTATGTGAGGTCCACTGTGCTGCACAAAACAAACTTTTTGGGTCTGAAATGGACTGGTATGGAATTCTTCAGGCTGAAAAATTTGCTGATGAAGCAACCATAAAGAAACAGTACAGAAAGCTTGCCCTGCTACTTCATCctgataaaaataagttttcagGTGCAGAAGCTGCTTTCAAATTGATTGGAGAGGCAAATAGGGTGTTGAATGACCAAGCAAAGCGTTCTTCGTATGACATGAAGTGTAGATCCTTCACGAGGACTGCAGCACCAAAGCCCCCATCCCATCACtcgaatgtgaatgtattttccaAGAAACATGATGTACATGTGAGAAACTATCAGAATAATTCACAGTCCACAAGTTGGAGTTCCCATCAGCAGGCTGCACTGCAGACATTCTGGACATCTTGTAATCACTGTAACACTTGGTATCAATACTACAAATCCGTTTTAAATGCAACCTTGCGTTGCCAACATTGTTCTAGGTCCTTCATAGCTCATGATTTGGGATTTCATGATGGCCCACCTGGGTCATATAAATGGGCTTCATTTAATAACCAGAGAGAATATCCAAAGTCAGAGTCCATGACAAAATGCACTGCTGGAGTTGGTGAGAACTGTAAAGTTGAAAGGAGTAAAGATGGCAATGTGGCTCCAGGAAGTGCAAAGGTAGATGTTAGAACGTCCAAGCCTGTTTCATCCAAGGCCAGGGAGCCACAAACCTCAACATATGTTGGAAGTAAGAGACCAAGGCAATCAATACCAGATTCCAGAGAAAGTTGCAAAACTGAAAATGGTAATGGCGTTGAAGACACCAATATTCGCGGAAGTGGTGTTGATCCTTCTGGACTTAATGCAGGAGTAAAGCCTAGGAGATCTTCCAGGGAAAAGCAGCATGTTTCTTACTCCGAGAGCTGTCATGATGATGTATTTGAGAGTCCTTCTAAAAGGGCACGCCAAAATGGATCATCTAGTACCATTGAGGTGGAAAAAAGAGAAGTACCTGCAAGTGTTGGAGTCAATTCTTCAGCTAGTTCTGCAGCTAGGGGTGTTCAGAGTGGAGGGGAGAGAAATAAAGCAAATGGTCCGCCAAAAGAAATATTTGCAAAGAAAAGCAAAAATGAACAGTCTAATGTTCATAGAATGGAGCCATCTAAGTCAGGTCTTGATGATACAAGCTCAAAAGCTGACTATTCTTCTCCATTGAATTCAAGTGTCCCCTCCAGTCCAGAGATCATCAGTTGTCCTGATCCAGATTTCTGCGATTTTGAAAAGAATAGGGCAGAGAATTGTTTTGCTACTGATCAATTTTGGGCTATTTATGATCCACGTGATAGTATGCCAAGATTCTATGCTCGTGTGAAGAAAGTGCTGTCCCCTGGATTCAAGGTACTGATTACTTGGCTGGAGCCTGACCCAGACAAGGAAGGTGAGATTGATTGGGATGATGCAGAATTGCCTGTTGGCTGTGGAAAGTTCGTTGTAGGTGAATCTCAGAAAACTGAAGATCTAGGTATGTTCTCTCATCAGGTGCATTGCATAAAGAAAAGTGGCAGAAGCCATTATATGGTATATCCTTGTAAAGGGGAAACATGGGCAATTTTTAGAGATTGGGATATTGGATGGAGTTCTAATCCTGAGAAGTATTCTAAGTATGAATTTCAATATGTGGAAGTTCTGTCTGATTTTGCTGAGAATGTTGGTGTTGAAGTTGTGTATCTTTGCAAAGTAAAAGGTTTTGTTAGCCTCTTTCAGCGAAGTGAGCATAATGGAGTTAGCTTATTTTGTGTTCCACCTAATGAGCTGTATAGGTTCTCACATCGAATTCCCTCGTTTAAGATGACTGGTGATGAAAGAGAAGGCGTTCCACCCGGATCTTTTGAACTAGACCCTGCTGGTCTTCCTGTTGATCTTTTTGAAGTTGGTGATACTGGTGATGTGAAGATGGATGATGGAATGCTTAACACTGGAGTCAAAAGTCCATGCCAGGAGTCCTCTGAACGTAAAGCAAAACATGTGATGGCTAATGAGAGTAGTCATGAGGCAAAGGTGCAAGGGAACAATGATGTCAAAAGAGCTTCCTCAATTCTTAGAAGGTCACCGAGGGGATCAAACAGAAAAGATATGGATAATGGTCAAGTAAATAAAAGTCAAAATATGACGAGTGAAGATGGTAGCAAAGACGGGGGCCACAAGGACTTGCCTCAACCTGAGGGAACTGATGAGAGTAGTGATTTGGCAAATGATGTtgaaagagcttcttcaattcTGAGAAGATCACCAAGGGGGCCAAACAGAAAAAATATGGAAAATGGTGAAGTAAATAAAAGCCAATATATGACTAGAGAGGACGGTAGGAAAGCAGGCTTCAGTCAACCGGAGGGAACTACTGCTGCAAGTCAGGCTGATGAGAAGGTCAAAACACCAAAGAAACCAGAGAAAAGTGATTGTGAAAGAGAGGGGTTGAATGTACGAAGATCGCCTAGAGATTTAAGCAAGAAAAAAGCTCGAGTAGATGCAGGTCAATGCGCAAATGGCGAGGTAAGTGGTGAACATTCAGATGCCAACAAAAATTCATGTTATGACTTCAGTATGGGAAAATCTAAAGAGAAGTTTGAGCGTGATCAGATATGGGCATTATATGGTGATGGAGATCAGATGCCTGGCACCTATGCAGTAATTAAGAAGATTGAAGTTGCCCCCAAGTTTAGATTGCACGTGGCGTTCCTTGAACCCTGTTCTCCGCCCAAAGCCATAGCTGGAGCAATAGCTTGTGGTACCTTCATGGTAAAAAATGCTAAAACGCAGATCCTTTCCCGTTCTGCTTTCTCTCATCAGTTACAAGTTGAACCCGTGGCAGGTAATAGATATGAAATTTACCCGAGGAAAGGTGAGATTTGGGCCCTGTTCAAGGCCCAGAACTATGAATCAACTTGTTCAAATCATGGGAGAGGTGATTGTCAAATAGTGGAAGTATTAGCAGATAATGACAAGAGTATAAAAGTTTTGGTTCTGGTGCGTCAAAGTGACACTAAGCCAATTTACAAGGCTCCTAGAGTCCAGAGATCTAAAACTGGTGTGATCGAAATTCCGCGTGGAGACGCATACAGATTTTCTCACCAAATTCCTGCTATTTGGCATAATGGGGAAGACAATATTGATCTGAGAGGGTGTTGGGAGCTTGATCCTTCTTCAATCCCTGTTTTATATGCTGAGGATTGGAGTGTTCAGAGGCGGTTGGCGTGGTACTTGTATAACAAGAGTGATATGAGAATCAGAAACAGTGTTGTATTGGGAAGAATTAGCTGGAAGTGGCGATGTTGCAGATCTTCTTGTTTCGAGTGA 3495 0.4157 MECNKDEALRAKKIAESKLQVGDFVGALKFAVKAQKLFPEVENIVHILTVCEVHCAAQNKLFGSEMDWYGILQAEKFADEATIKKQYRKLALLLHPDKNKFSGAEAAFKLIGEANRVLNDQAKRSSYDMKCRSFTRTAAPKPPSHHSNVNVFSKKHDVHVRNYQNNSQSTSWSSHQQAALQTFWTSCNHCNTWYQYYKSVLNATLRCQHCSRSFIAHDLGFHDGPPGSYKWASFNNQREYPKSESMTKCTAGVGENCKVERSKDGNVAPGSAKVDVRTSKPVSSKAREPQTSTYVGSKRPRQSIPDSRESCKTENGNGVEDTNIRGSGVDPSGLNAGVKPRRSSREKQHVSYSESCHDDVFESPSKRARQNGSSSTIEVEKREVPASVGVNSSASSAARGVQSGGERNKANGPPKEIFAKKSKNEQSNVHRMEPSKSGLDDTSSKADYSSPLNSSVPSSPEIISCPDPDFCDFEKNRAENCFATDQFWAIYDPRDSMPRFYARVKKVLSPGFKVLITWLEPDPDKEGEIDWDDAELPVGCGKFVVGESQKTEDLGMFSHQVHCIKKSGRSHYMVYPCKGETWAIFRDWDIGWSSNPEKYSKYEFQYVEVLSDFAENVGVEVVYLCKVKGFVSLFQRSEHNGVSLFCVPPNELYRFSHRIPSFKMTGDEREGVPPGSFELDPAGLPVDLFEVGDTGDVKMDDGMLNTGVKSPCQESSERKAKHVMANESSHEAKVQGNNDVKRASSILRRSPRGSNRKDMDNGQVNKSQNMTSEDGSKDGGHKDLPQPEGTDESSDLANDVERASSILRRSPRGPNRKNMENGEVNKSQYMTREDGRKAGFSQPEGTTAASQADEKVKTPKKPEKSDCEREGLNVRRSPRDLSKKKARVDAGQCANGEVSGEHSDANKNSCYDFSMGKSKEKFERDQIWALYGDGDQMPGTYAVIKKIEVAPKFRLHVAFLEPCSPPKAIAGAIACGTFMVKNAKTQILSRSAFSHQLQVEPVAGNRYEIYPRKGEIWALFKAQNYESTCSNHGRGDCQIVEVLADNDKSIKVLVLVRQSDTKPIYKAPRVQRSKTGVIEIPRGDAYRFSHQIPAIWHNGEDNIDLRGCWELDPSSIPVLYAEDWSVQRRLAWYLYNKSDMRIRNSVVLGRISWKWRCCRSSCFE 1164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3932 1164 MobiDBLite consensus disorder prediction 730 750 - -
Sto13g3932 1164 MobiDBLite consensus disorder prediction 340 365 - -
Sto13g3932 1164 MobiDBLite consensus disorder prediction 283 300 - -
Sto13g3932 1164 MobiDBLite consensus disorder prediction 441 459 - -
Sto13g3932 1164 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Sto13g3932 1164 SUPERFAMILY Chaperone J-domain 61 131 IPR036869 -
Sto13g3932 1164 PANTHER - 1 697 - -
Sto13g3932 1164 PANTHER - 734 1118 - -
Sto13g3932 1164 CDD DnaJ 67 120 IPR001623 -
Sto13g3932 1164 MobiDBLite consensus disorder prediction 366 380 - -
Sto13g3932 1164 MobiDBLite consensus disorder prediction 757 774 - -
Sto13g3932 1164 MobiDBLite consensus disorder prediction 714 728 - -
Sto13g3932 1164 MobiDBLite consensus disorder prediction 854 887 - -
Sto13g3932 1164 MobiDBLite consensus disorder prediction 260 459 - -
Sto13g3932 1164 MobiDBLite consensus disorder prediction 775 789 - -
Sto13g3932 1164 Pfam DnaJ domain 67 128 IPR001623 -
Sto13g3932 1164 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 734 1118 - -
Sto13g3932 1164 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 697 - -
Sto13g3932 1164 PRINTS DnaJ domain signature 69 87 IPR001623 -
Sto13g3932 1164 PRINTS DnaJ domain signature 87 102 IPR001623 -
Sto13g3932 1164 PRINTS DnaJ domain signature 103 123 IPR001623 -
Sto13g3932 1164 Pfam Domain of unknown function (DUF3444) 904 1100 IPR024593 -
Sto13g3932 1164 Pfam Domain of unknown function (DUF3444) 460 668 IPR024593 -
Sto13g3932 1164 MobiDBLite consensus disorder prediction 388 402 - -
Sto13g3932 1164 Gene3D DnaJ domain 64 183 IPR036869 -
Sto13g3932 1164 MobiDBLite consensus disorder prediction 413 440 - -
Sto13g3932 1164 SMART dnaj_3 66 123 IPR001623 -
Sto13g3932 1164 MobiDBLite consensus disorder prediction 700 902 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3932 Sto-Chr13 40351750 40357203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3932 4 219 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.883 1.17e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3932 - - aprc:113861153 1167.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3932 13 40351750 40357203 Sto13g3932 13 40351750 40357203 CCT
Sto13g3932 13 40351750 40357203 Sto13g3932 13 40351750 40357203 ECH