Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3912 ATGATGGAGATTAATAATACTACTAGTATTGCACCTGCAGGGTCTCCTACTCCTTTTAAGAACCATACGAAAACACACCACCATTCAAATAATAACTATAAGCATCACCATCTCCCCTCCAAAACCAATCTCATTATCATCATAGCGGTGGCATTAGTTATGCTGCTGCTGCTTGCTATTTGTGTCCTGATATTGATGCTTCGTCGCCTGAAATTGTCAAGTAATTGCAAAGACAAGAGAAAGAGCAGACAAGTTGATGAGACAAGTTGCAGGTTCCTGGCTTCAACAGCATTGATGAGCTTCAATTGTAGCCCAGATGTGAAGGGAGGGTGTCTGAGTGGGGGGAGTATGAGCATGAACAGGACAGGTGGAGGTAAAGTAAAAGGAGTGCAAGTGTTGACATATAGAGAGATAGAAATGGCGACAGAGGGATTCAGTGAAAGGAATGTAATTGGGAATGGAGGGTTTGGTTTGATGTACAGAGGAGTCTTGAATGATGGTACTTTGGTAGCCGTCAAGATGCTGCCAAGGCAAGGTAAGCAAGGGGAACGTGCCTTCCGAATTGAGTGTCCATATTTGGTGGAGTTAGTTGGATATTGTGCTGACCAGCAGTACAGGTTACTAGTATTTGAGTTGATGGGGAATGGCACACTGTATCAGCATCTCCACTGTGGTACGAGTAAAGCTAAAGCGTTGGATTGGTGGAGGCGGATGAGGATAGCCCTTGATTGTGCGAGGGCATTAGAATTCCTACAcgaacacgtggcaccaccagTCATCCACCGTGACTTCAACTGCAACAACGTTCTACTGGATCACAACTTTCGCGCCAAGCTGTGTAATCTGGGAATGGCGAAGATGGAGGGTCAGATTTCCACTCGTGTGTCGGGGACCACTGGATATGTAGCACCAGAGTATGCATACTCAGGGAAGGTGACCACAAAGTGTGATGTGTACAGCTATGGGGTGGTTCTGCTGGAGTTGCTCACAGGACGTGTACCAGTTGATATTAAGCGACCCCCCGGTGAACATGTTCTTGTCTCTTGGGCTCTTCCAAGGTTAACAAACAGAGAAAAGCTGGTGGAAATGGTTGACCCAGCTCTACGAGGACACTACTCAAACAAGGATCTCATTCAgattgGTGCGATTGCAGCCATGTGCATACAACCAGAAGCAGATTACAGGCCGCTTATGATAGATGTTGTACAATCACTGATACCACTTGTGAGGAGTACTAGCGTTGCTTCATTTACTTCCCCAACATCTTCCAAACAATATTCATTCCCTTAA 1290 0.4473 MMEINNTTSIAPAGSPTPFKNHTKTHHHSNNNYKHHHLPSKTNLIIIIAVALVMLLLLAICVLILMLRRLKLSSNCKDKRKSRQVDETSCRFLASTALMSFNCSPDVKGGCLSGGSMSMNRTGGGKVKGVQVLTYREIEMATEGFSERNVIGNGGFGLMYRGVLNDGTLVAVKMLPRQGKQGERAFRIECPYLVELVGYCADQQYRLLVFELMGNGTLYQHLHCGTSKAKALDWWRRMRIALDCARALEFLHEHVAPPVIHRDFNCNNVLLDHNFRAKLCNLGMAKMEGQISTRVSGTTGYVAPEYAYSGKVTTKCDVYSYGVVLLELLTGRVPVDIKRPPGEHVLVSWALPRLTNREKLVEMVDPALRGHYSNKDLIQIGAIAAMCIQPEADYRPLMIDVVQSLIPLVRSTSVASFTSPTSSKQYSFP 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3912 429 MobiDBLite consensus disorder prediction 1 35 - -
Sto13g3912 429 MobiDBLite consensus disorder prediction 1 20 - -
Sto13g3912 429 Gene3D Phosphorylase Kinase; domain 1 117 212 - -
Sto13g3912 429 Gene3D Transferase(Phosphotransferase) domain 1 213 421 - -
Sto13g3912 429 MobiDBLite consensus disorder prediction 21 35 - -
Sto13g3912 429 ProSiteProfiles Protein kinase domain profile. 145 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3912 429 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 2 425 - -
Sto13g3912 429 SUPERFAMILY Protein kinase-like (PK-like) 129 405 IPR011009 -
Sto13g3912 429 PANTHER OS01G0750732 PROTEIN 2 425 - -
Sto13g3912 429 Pfam Protein kinase domain 146 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3912 Sto-Chr13 40223415 40225693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3912 50 423 Receptor kinase-like Gene Family AT3G58690 50.769 7.01e-130 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Sto13g3912 Pkinase 2.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3912 - - jre:109008160 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3912 13 40223415 40225693 Sto13g3912 13 40223415 40225693 ECH