Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3890 ATGCAAGACATTTTCGGATCAGTTCGCCGATCACTGGTATTTCGTACTACGCCGGAGAACGAAGAAGCATCACTTGGAGGAACCCTAGTTGATAAGATCAATTCTTGCATCCGAAAGTCCAGAGTCTTCTCTAAACCCTCGCCGGCCTCACCGCCACTGCCACCAATCCCTAAGGACTCTGCGCCTATGATCCGATGGCGCAAGGGCGAGTTGATCGGATGCGGTGCCTTTGGCCGAGTTTACATGGGCATGAATCTTGATTCTGGAGAGCTTATAGCAGTAAAACAGGTTCTGATTGCAGCAAGTAGTGCTTCGAAGGAGAAGGCACAGGCTCACATAAAGGAGCTTGAGGAAGAAGTTAAGCTTCTTAAAGATCTTTCACATCCCAACATTGTTAGATATTTGGGTACAGTTAGAGAGGAGGACACCTTAAATATTCTTCTGGAGTTTGTTCCTGGTGGATCTATATCATCACTCTTGGGGAAGTTTGGAGCTTTCCCTGAGGCTGTAATAAGAACTTACACGAAGCAGTTACTACTGGGACTCGAGTACTTGCACACAAATGGCATTATGCACAGGGACATTAAGGGGGCAAATATCCTTGTCGATAATAAAGGATGCATAAAACTTGCAGATTTTGGAGCTTCCAAACAGGTCGTCGAGCTGGCTACCATTTCCGGTGCCAAGTCTATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTTATTCTACAGACTGGGCATAGCTTCTCTGCTGACATATGGAGTGTTGGCTGTACTGTGATTGAGATGGCCACTGGAAAACCTCCTTGGAGCCAGCAGTATCAAGAGGTTGCTGCTCTCTTCCATATAGGGACAACGAAGTCTCATCCACCAATCCCTGATCATCTCTCTGTTGGAGCAAAAGATTTTCTGTTAAAATGTTTGCAGAAGGAACCAATCTTGAGGCCATCAGCATCAGAACTGCTGCAGCATCCCTTTGTTACTGGCGAACACATCGGTTCATTTCATATGTCATGTACTGCGATGGAAAATATGGAAGCTCTTTCAGCATCTTGTGCCCCAAATCTTGAAACGTTTCCGAGCTGCTCAACTGTACATCCTCAGGAAACACAAAATAGAGAGTTATGGGGAATGAGCAATGATGACGACATGTGCGAGATTGATGACAAAGACGAGTTCTCTGAAGGGGAGGTCAAATTCAGATCTTTGATGTCAGAAAATATTCAGAGTTTCAACCCTATGTCTGATCCCTCTGACGATTGGGATTGCAAATTTGATATGAGTCCAGAGCTGGACCATAGTGGAGTTAGTATTAACACTGATGAAATGTACCTGCCTTCTGGCCATCCGGGGACTCTCCACGAGGAGCCGAAAGATTTTTCCTTTTCATGCGAACCATCCGTGTCAGAGGATGATGAGGAACTCACGGAGTCAAAAATACAAGCTTTTTTGGACGAGAAGGCTCTAGGACTGAAAAAATTGCAGACACCTTTGTATGAAGAGTTTTACAACAGTTTAAATACGTCTTGTTCTCCCAATGCTGTTGAAAGCACTAGTGAAGAAACTACTCCAAAGTTCTTGAAATTACCCCCTAAAAGTAGGTCACCAAATCGGGTGCCAATTGGCTCCCCCTCTAAAGCAGTTGATAATACCGGAAGTCCTGGAAGTAATGGCAGGTCCTCACCAAATGTTGGCCATGCAAATGATAATAGCTCACAGAACATACCATCACCACCCCTTAATGAATGGAAAGGATTGCTAGTTGATTCCCAGCAGGAGCCTAGTAGCCCAAGTTTAAGCTTTTCTGAGAGGCAGAGGAAGTGGAAAGAAGAACTCGACCAGGAGCTCGAGAGAAAGCGAGAAATGATGCGCCAAGCTGGTATGGGGGGAAAAACTTCGTCACCAAAGGAACGAGCCGGAAATCGGCAGAGAGAGAAGACAAGATTTGCATCACCCTGCAAATAA 1968 0.4543 MQDIFGSVRRSLVFRTTPENEEASLGGTLVDKINSCIRKSRVFSKPSPASPPLPPIPKDSAPMIRWRKGELIGCGAFGRVYMGMNLDSGELIAVKQVLIAASSASKEKAQAHIKELEEEVKLLKDLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTYTKQLLLGLEYLHTNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPDHLSVGAKDFLLKCLQKEPILRPSASELLQHPFVTGEHIGSFHMSCTAMENMEALSASCAPNLETFPSCSTVHPQETQNRELWGMSNDDDMCEIDDKDEFSEGEVKFRSLMSENIQSFNPMSDPSDDWDCKFDMSPELDHSGVSINTDEMYLPSGHPGTLHEEPKDFSFSCEPSVSEDDEELTESKIQAFLDEKALGLKKLQTPLYEEFYNSLNTSCSPNAVESTSEETTPKFLKLPPKSRSPNRVPIGSPSKAVDNTGSPGSNGRSSPNVGHANDNSSQNIPSPPLNEWKGLLVDSQQEPSSPSLSFSERQRKWKEELDQELERKREMMRQAGMGGKTSSPKERAGNRQREKTRFASPCK 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3890 655 SUPERFAMILY Protein kinase-like (PK-like) 65 329 IPR011009 -
Sto13g3890 655 MobiDBLite consensus disorder prediction 539 580 - -
Sto13g3890 655 ProSiteProfiles Protein kinase domain profile. 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3890 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Sto13g3890 655 Coils Coil 99 126 - -
Sto13g3890 655 SMART serkin_6 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3890 655 MobiDBLite consensus disorder prediction 589 603 - -
Sto13g3890 655 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1 1 618 - -
Sto13g3890 655 Gene3D Transferase(Phosphotransferase) domain 1 65 358 - -
Sto13g3890 655 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Sto13g3890 655 MobiDBLite consensus disorder prediction 511 525 - -
Sto13g3890 655 CDD STKc_MAPKKK 65 328 - -
Sto13g3890 655 MobiDBLite consensus disorder prediction 511 655 - -
Sto13g3890 655 MobiDBLite consensus disorder prediction 604 626 - -
Sto13g3890 655 MobiDBLite consensus disorder prediction 638 655 - -
Sto13g3890 655 Coils Coil 606 626 - -
Sto13g3890 655 MobiDBLite consensus disorder prediction 448 474 - -
Sto13g3890 655 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 618 - -
Sto13g3890 655 Pfam Protein kinase domain 67 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3890 Sto-Chr13 40116251 40121228 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3890 1 655 MAP Kinase Kinase Kinase AT1G54960 57.368 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sto13g3890 Pkinase 4.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3890 K20606 - gmx:100807537 1024.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3890 13 40116251 40121228 Sto13g3890 13 40116251 40121228 ECH