Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3871 ATGACTTTTGCTTGCAAGAAAATGGCTTGTGTTTCTGAGGTTGTACGCTCCATCCTCTTGATGCTCCTCTTATCATTTCAGAGAACCCACATTTTGTCTGTGGATGCCGTGTTAAATGCTCAAGCAGGAAACTTGCACATCCATGGCCTAGAAAATGAAAACCCCATCAAGAAAATCTCAGGACTGGATGAGAATGAAGAGAAGGAAGCGTTGATAGTGGAAAAGTTCAGAACTTTGCTTGGTCTCAAGAGCTTCCACATCAAAAGGCCTTCCAATGGCGATTCAGATCAGTCTCTCTCTCCATCACCTTCTCCTTTACCCACCATTGAAGCGGAggctccttctccttctccttctccatcTTCATCTCATCTTCCCTTACCTCACGTATTTGCTCATCCCTTTCCTCCACGCCATCGCTCTCACCGGAATCCACCCACTCACAGGTTTCACCATGAAGATAGAGGCAGAGCTAAAGCAATACTAGTGGGTGTTCTTGTGTCTGTGGGAGTTGCTACAGTGATTTGCGTTCTTGGGCTTATCTGGGTTTTGAGGAAATTCAGAAATCACACCAAGAAACCAAAAAGGACAATGCCACTCTGTAGCAAGAACAGAGGAAGTGGAGGTAGTCGTGAGAATTCATCAAGCCAGGTGGGTTTAAACTCTACCCTAGATCTGTTTTATCTTAATTCTTTAGGCGATGATATAGAGCAACACACTCGCAGCTTGAAGCAAGATTGTGTAACGGTAAACACAAACTCAAAACATAGCTCCCCAAAACGTGCGATTTATCATGAGAAGGTGGAGTTAAACCAACAAGTGATGATTAGCCCAGAATATAATGATAATGCTAGCAGTTCTTCCACAAAAGAAATTCTATCTGTTCACCATGATGTGGAATCAGTGAAATATGAATCCGAATCTGATGGTGATGGCGATGGTGGTGCTAAAATTATTACCACGGAATGCCATTCATCAGATAATGAGAGCTTTCATTCCCTCGTTGATTCCCACTCATCCAATGTCAGACTTTCCAATGCTTCAGATGGTGCTCAAAGTGAGACATTATTAGCTCAGTCCCCTCAATTATCATCTCACTCTAATTCTATCCTAAACCCAATTCCATTACCAAAACAAAATTCAGTTTCCAAGATAGAATTAGAATCTCCCCAATCATTACAAATTCCAAAGCAGGAATCTCAAAACATTGAAAATTATCCACAAGCCTCCATgcccccaccaccaccacctcctcctccacctCTACAAATGCCCTTGTTTTCTTTGCATTCTCTTACTTCTTCGTCTAAATCTCCACGTTCTTCAACATTCCGTGATTTGTCATCTCCAAGAAATTCAGAATCTTTCTCATCATCATTGAATCAAACTACAGAAAATGACAAGCCTTCACTTTCACCTCCTAGCATCATTCCTCCACCACCATGTCCTCCTCCACTACCCTTTAGATCGAACATTAATAACAATGTGAAAACTCCACCTCCTCCTCCATCTCAGCTTCCTCAATTCACGCCACGTGGCAAAGATGGAGCCCCATTGCCAAAACTTAAACCACTTCATTGGGACAAAGTAAGAGCTGCCCCAGATCGCACAATGGTTTGGGATAAGCTTCGATCCAGCTCATTTGAGTTCGATGAGGAAATGATCGAGTCACTTTTTGGCTACAATTTACAAAACTCAATGAAGAACGAAGAGACAAAGAGTAAAAGCCCTTCTCCAAGCAAGCATGTGCTGGAGCCAAAGAGGTTGCAAAACATAACAATTCTGTCAAAGGCTCTTAATGTGACAGCTGAGCAACTATGTGAAGCCCTAATACaagGTAGGGGCTTGTCTTTGCAACAACTAGAGGCACTAGTGAAGATGGTGCCTACCAAGGAAGAAGAGGAGAAGCTCTCAAGTTATAAAGGAAACATAAATGAATTGGGATCGGCGGAAAAGTTTGTAAAGGCAATGCTTAGCGTACCCTTTGCCTTTCCACGTGTGGATGCCATGCTTTACAGAGAAACTTTTGAAGATGAGATTGTCCACCTCAGGAACTCTTTTTCAATGCTGGAGGAGGCATGCAAGGAGCTAAGATCAAGCAGGCTGTTCTTGAAGCTACTAGAAGCTGTGCTCAAAACAGGAAATCGTATGAACGTGGGAACAATAAGAGGAGGAGCGAGAGCATTTAAGCTGGACGCCCTCCTGAAGCTCGCTGATGTTAAAGGAACTGATGGCAAAACTACGTTACTCCATTTCGTTGTGCAGGAGATAATTCGATCAGAAGGAATCAGAGTATCAGATAGCATTATGGGGAAAATCAGCCAGAAAAGCAAGAACAGAAcagaggaagagaaggaagaggatTACAGAAGAATGGGGCTAGAACTCGTTTCTGGACTCAGCACCGAGTTATACAACGTCAAGAAAACAGCAACTATTGACTTGGACGTTCTCGCTAGCTCTGTGTCTAACCTTAAAGAAGGAGTTTCCAAGCTGCGAAATCTAGTACAGGAGTTGCACACGGATGAGAATAGTGACAAGTTTGTGGATTCCATGAAGGTGTTCTTGAATTATGCAGATAGAAATCTGAGGAATTTACAAGGAGACGAGGATAGGGTGCTAGCACGCGTGAAAGAAATAACGGAGTATTTTCATGGGGATGTGAGCAAAGAAGACGCAAACCCGCTTAGGATATTTGTGATAGTGAGGGACTTTCTGGGCATGTTAGATAATGTGTGTAAAGAACTTAGGAGGTCTAAAGTTCCACGAAGCCCAACCCCTCTCGCTCCATTCAGATAG 2799 0.4151 MTFACKKMACVSEVVRSILLMLLLSFQRTHILSVDAVLNAQAGNLHIHGLENENPIKKISGLDENEEKEALIVEKFRTLLGLKSFHIKRPSNGDSDQSLSPSPSPLPTIEAEAPSPSPSPSSSHLPLPHVFAHPFPPRHRSHRNPPTHRFHHEDRGRAKAILVGVLVSVGVATVICVLGLIWVLRKFRNHTKKPKRTMPLCSKNRGSGGSRENSSSQVGLNSTLDLFYLNSLGDDIEQHTRSLKQDCVTVNTNSKHSSPKRAIYHEKVELNQQVMISPEYNDNASSSSTKEILSVHHDVESVKYESESDGDGDGGAKIITTECHSSDNESFHSLVDSHSSNVRLSNASDGAQSETLLAQSPQLSSHSNSILNPIPLPKQNSVSKIELESPQSLQIPKQESQNIENYPQASMPPPPPPPPPPLQMPLFSLHSLTSSSKSPRSSTFRDLSSPRNSESFSSSLNQTTENDKPSLSPPSIIPPPPCPPPLPFRSNINNNVKTPPPPPSQLPQFTPRGKDGAPLPKLKPLHWDKVRAAPDRTMVWDKLRSSSFEFDEEMIESLFGYNLQNSMKNEETKSKSPSPSKHVLEPKRLQNITILSKALNVTAEQLCEALIQGRGLSLQQLEALVKMVPTKEEEEKLSSYKGNINELGSAEKFVKAMLSVPFAFPRVDAMLYRETFEDEIVHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIIRSEGIRVSDSIMGKISQKSKNRTEEEKEEDYRRMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLKEGVSKLRNLVQELHTDENSDKFVDSMKVFLNYADRNLRNLQGDEDRVLARVKEITEYFHGDVSKEDANPLRIFVIVRDFLGMLDNVCKELRRSKVPRSPTPLAPFR 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3871 932 ProSiteProfiles Formin homology-2 (FH2) domain profile. 512 932 IPR015425 -
Sto13g3871 932 MobiDBLite consensus disorder prediction 408 425 - -
Sto13g3871 932 Gene3D Formin, FH2 domain 536 924 IPR042201 -
Sto13g3871 932 MobiDBLite consensus disorder prediction 342 375 - -
Sto13g3871 932 PANTHER FORMIN-RELATED 18 339 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Sto13g3871 932 PANTHER FORMIN-RELATED 408 932 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Sto13g3871 932 SMART it6_source 512 924 IPR015425 -
Sto13g3871 932 MobiDBLite consensus disorder prediction 427 471 - -
Sto13g3871 932 MobiDBLite consensus disorder prediction 203 217 - -
Sto13g3871 932 SUPERFAMILY Formin homology 2 domain (FH2 domain) 525 920 - -
Sto13g3871 932 MobiDBLite consensus disorder prediction 107 123 - -
Sto13g3871 932 MobiDBLite consensus disorder prediction 194 217 - -
Sto13g3871 932 MobiDBLite consensus disorder prediction 91 105 - -
Sto13g3871 932 MobiDBLite consensus disorder prediction 90 153 - -
Sto13g3871 932 PANTHER FORMIN-LIKE PROTEIN 18 339 - -
Sto13g3871 932 PANTHER FORMIN-LIKE PROTEIN 408 932 - -
Sto13g3871 932 MobiDBLite consensus disorder prediction 472 488 - -
Sto13g3871 932 MobiDBLite consensus disorder prediction 301 320 - -
Sto13g3871 932 MobiDBLite consensus disorder prediction 404 524 - -
Sto13g3871 932 Pfam Formin Homology 2 Domain 514 909 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3871 Sto-Chr13 39992020 39995829 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3871 497 932 FH2 protein (formin) Gene Family AT3G05470 75.682 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3871 - - gmx:100793761 1014.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3871 13 39992020 39995829 Sto13g3871 13 39992020 39995829 CCT
Sto13g3871 13 39992020 39995829 Sto13g3871 13 39992020 39995829 ECH