Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3857 atgatgatgatgaccatGGAGGGAATGATGGACAAGGGCGTTCTCGATGATGTTATTCGAAGGCTGCTCGAAGGCAAAGGAGGAAAACAGGTCCAGCTTTCTGAGTCGGAGATCCGTCAACTCTGCGTCAACGCCCGCCAAATCTTCCTCTCTCAGCCCAATCTCCTCGAGCTCCATGCTCCTATCCGCATTTGTGGTGATATACATGGACAGTACCAAGACTTACTGAGGCTTTTCGAGTATGGTGGCTACCCTCCTGCTGCAAACTACTTGTTTATGGGGGATTACGTAGACAGAGGAAAGCAAAGTTTGGAGACCATATGTTTGCTTTTGGCCTACAAAATAAGATATCCTGACAAAATTCATCTCTTGAGAGGAAACCATGAAGAGGCAAAGATAAACCGGATATATGGGTTTTATGATGAATGTAAAAGGAGGTTCAATGTTAGGCTATGGAAGATATTTACTGACTGCTTTAACTGTTTGCCGGTAGCTGCTCTCGTTGATGACAAAATAATTTGTATGCATGGGGGACTCTCTCCAGAATTACAAACATTAGATCAGATAAGGGAGATTCCAAGGCCTACCGAAGTACCAGATAATGGTCTTCTCTGTGACCTGCTTTGGTCTGATCCTGATCCTAACATTGAAGACTGGGCAGAGAGTGACCGGGGCGTTTCATGTACTTTTGGGCCTGGTGCAATCAGAGACTTTTTGAATAAGAATGACCTTGATCTCATTTGCCGTGGTCATCAGGTGGTGGAGGATGGATATGAGTTTTTCGCTAAACGAAGGTTAGTCACAATATTTTCTGCTCCAAACTATGGTGGGGAGTTTGATAATGCCGGTGCATTGTTAAGCGTTGATGAAGCTCTTGTATGTTCCTTTGAGATATTGAAACCCATTGATAGAGGATCAGGAAGCGGTTCCAAAGTGCCTCTTAAAAAGTATTCCTCTCGCTTAGTGGGACACTATGCTATTCAGTATTCACCCTGTTGGAGTCCTCTGTTCGTGTGA 1017 0.4376 MMMMTMEGMMDKGVLDDVIRRLLEGKGGKQVQLSESEIRQLCVNARQIFLSQPNLLELHAPIRICGDIHGQYQDLLRLFEYGGYPPAANYLFMGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEEAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALVDDKIICMHGGLSPELQTLDQIREIPRPTEVPDNGLLCDLLWSDPDPNIEDWAESDRGVSCTFGPGAIRDFLNKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDEALVCSFEILKPIDRGSGSGSKVPLKKYSSRLVGHYAIQYSPCWSPLFV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3857 338 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2 323 - -
Sto13g3857 338 Pfam Calcineurin-like phosphoesterase 62 253 IPR004843 GO:0016787
Sto13g3857 338 PRINTS Serine/threonine phosphatase family signature 61 88 IPR006186 GO:0016787
Sto13g3857 338 PRINTS Serine/threonine phosphatase family signature 90 117 IPR006186 GO:0016787
Sto13g3857 338 PRINTS Serine/threonine phosphatase family signature 123 147 IPR006186 GO:0016787
Sto13g3857 338 PRINTS Serine/threonine phosphatase family signature 157 183 IPR006186 GO:0016787
Sto13g3857 338 PRINTS Serine/threonine phosphatase family signature 186 213 IPR006186 GO:0016787
Sto13g3857 338 PRINTS Serine/threonine phosphatase family signature 243 263 IPR006186 GO:0016787
Sto13g3857 338 PRINTS Serine/threonine phosphatase family signature 265 281 IPR006186 GO:0016787
Sto13g3857 338 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 8 2 323 - -
Sto13g3857 338 SMART pp2a_7 33 303 IPR006186 GO:0016787
Sto13g3857 338 SUPERFAMILY Metallo-dependent phosphatases 16 303 IPR029052 -
Sto13g3857 338 Pfam Serine-threonine protein phosphatase N-terminal domain 15 58 IPR031675 -
Sto13g3857 338 ProSitePatterns Serine/threonine specific protein phosphatases signature. 124 129 IPR006186 GO:0016787
Sto13g3857 338 Gene3D - 8 307 IPR029052 -
Sto13g3857 338 CDD MPP_PP1_PPKL 14 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3857 Sto-Chr13 39909854 39912362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3857 40 249 Calmodulin-binding Proteins AT5G63870 30.400 1.35e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3857 K06269 - gmx:100805030 590.882