Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3854 ATGAGCAAAGTTAACAAGCCTCCACTTTCTTTGTCAAGGTTGATCAAGTTTATGAATGGAAAGGAAGGTAAGATTGGTGTGGTGGTGGGGACTGTAACTGATGATATACGAGCATATGAAGTTCCCCCCTTGAAAGTTACAGCACTCCGGTTTACAGAGACTGCACGGGCTAGAATCGAAAAGGCTGGTGGTGAGTGCTTGACATTTGACCAGCTGGCTCTTAGGGCTCCTCTGGGACAGAACACGGTGCTTCTTAGAGGCCCAAAGAATTCTCGGGAAGCTGTGAAGCATTTTGGCCCTGCACCTGGTGTGCCACACAGCCACACCAAGCCTTATGTGCGATCTAAGGGAAGGAAGTTTGAGAGGgctagaggaaggagaaacagcagaggatttagggtttaa 405 0.442 MSKVNKPPLSLSRLIKFMNGKEGKIGVVVGTVTDDIRAYEVPPLKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSRGFRV 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3854 134 MobiDBLite consensus disorder prediction 111 134 - -
Sto13g3854 134 Gene3D - 1 134 - -
Sto13g3854 134 PANTHER 60S RIBOSOMAL PROTEIN L18 1 133 IPR000039 GO:0003735|GO:0005840|GO:0006412
Sto13g3854 134 Pfam Ribosomal protein 60S L18 and 50S L18e 1 134 IPR021131 -
Sto13g3854 134 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 1 133 - -
Sto13g3854 134 SUPERFAMILY Ribosomal proteins L15p and L18e 2 86 IPR036227 -
Sto13g3854 134 MobiDBLite consensus disorder prediction 94 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3854 Sto-Chr13 39903474 39904136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3854 1 134 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 84.328 6.69e-84 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3854 K02883 - csv:101209626 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3854 13 39903474 39904136 Sto13g3854 13 39903474 39904136 CCT