Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3845 ATGGCGACGAGGAATCGCACTTTGCTTTACAGAAAGTACAGAGATGCATTGAAGAGTGTTCGCGTTCCGTCGAGCTCCTCCGCGTCGACGAGTACCGGTGCTACTGGTGGCCCGGTGATTGAATTGGTCAGTACGTCGCTTCTGAATCAGAATCGTTCTTACGCTCCTCTTAGTACTGAGGATCCTGGTAATTCAAGTAAGGGTCCACTTACTGTGGGGCTACCTCCAGCGTGGGTAGATGTGTCTGAAGAAATATCTGCAAATGTGCAACGCGCACGCACAAAAATGGCAGAGTTAGCCAAGGCTCATGCAAAGGCTTTAATGCCATCATTTGGAGATGGTAAGGAAGATCAACGAGCTATTGAGACTCTAACTCATGAGATAACTGACTTAATAAAGAGATCAGAGAGGAGATTGCAGAGACTTTCTGCAACTGGACCTTCTGAGGATTCCAATGTCAGGAAGAATGTGCAGCGTTCTCTGGCTACTGACCTTCAGAACCTCTCTGTAGAACTCCGCAAGAAACAATCAACTTATTTGAAGCGCCTCAGACAGCAAAAGGAGAGTCAAGATGGGGTGGATCTAGAGATGAACATAAATGGAAGTAAATCCAGATTTGAAGATGATGCCTTGGACAGCATGGTATTTAATGACCATCAGATGGCCAagctaaaaaaaagtgaagcatTCACTGtagaaagggaaaaagaaatcCAACAGGCAAGCAAAAGTTCCTTATTTGCTGTTGTGGAATCTGTAAATGAGCTTGCTCAAATTATGAAGGATCTTTCTGTACTAGTAATAGACCAGGGAACCATTGTTGATAGAATAGACTACAACATTCAGAATGTTGCAACCACAGTTGAGGATGGCCTTAAACAGCTGCAGAAGGCAGAGAGAACACAAAAAAAAGGGGGCATGGTGATGTGTGCTACGGTGCTTGTTATCATGTGCTTCGTTATGTTGGTTCTCTTAGTCCTTAAGGAAATAATTTTGTGA 999 0.4264 MATRNRTLLYRKYRDALKSVRVPSSSSASTSTGATGGPVIELVSTSLLNQNRSYAPLSTEDPGNSSKGPLTVGLPPAWVDVSEEISANVQRARTKMAELAKAHAKALMPSFGDGKEDQRAIETLTHEITDLIKRSERRLQRLSATGPSEDSNVRKNVQRSLATDLQNLSVELRKKQSTYLKRLRQQKESQDGVDLEMNINGSKSRFEDDALDSMVFNDHQMAKLKKSEAFTVEREKEIQQASKSSLFAVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEDGLKQLQKAERTQKKGGMVMCATVLVIMCFVMLVLLVLKEIIL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3845 332 CDD SNARE_syntaxin16 233 297 - -
Sto13g3845 332 SMART SynN_4 69 184 IPR006011 GO:0016020
Sto13g3845 332 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 236 298 IPR000727 -
Sto13g3845 332 Gene3D - 75 290 - -
Sto13g3845 332 Pfam SNARE domain 272 324 IPR000727 -
Sto13g3845 332 Coils Coil 82 102 - -
Sto13g3845 332 PANTHER SYNTAXIN 1 327 IPR045242 -
Sto13g3845 332 PANTHER SYNTAXIN-43-LIKE 1 327 - -
Sto13g3845 332 SUPERFAMILY t-snare proteins 74 291 IPR010989 GO:0016020|GO:0016192
Sto13g3845 332 SMART tSNARE_6 231 298 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3845 Sto-Chr13 39826454 39829761 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3845 1 332 SNARE and Associated Proteins AT5G26980 76.577 0.0 509
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3845 13 39826454 39829761 Sto13g3845 13 39826454 39829761 ECH