Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3843 ATGGATCGGGAAGGAGGATCCAACGGCGGATCTTGCTACTACTCCGTTCTCGGGATTCGTAGGGACGCCTCCTTCTCTGATATTCGCACTGCCTATCGGAATCTCGCTCTGAAGAGGTGGCACCCGGACAGATGGGCGCGAAATCCTGCAATCGCCGGAGAAGCCAAACGGCGGTTTCAGCAAATCCAGGAAGCTTACTCAGTTCTTTCGGATCAATCTAAAAGGTCAATGTATGACGCCGGCCTCTACGATCCtttagaagaagaagatcaaGAATTCTGCGATTTCATGCAAGAAATGATCTCAATGATGAACAATGTGAAAGACGAGGGGGATAGTTTAGAGGATCTACAAAGGATGTTCATGGAAATGGTAGGTGGAGATGGGATGAGCTTTGAAGTGAAGGAAGATCAATCAGGTTGCAAGAGACATCGCGTGAGCACGCCAAGAGGTAACACGGCTAAGCGTAGCAATTCTGCCAACTCTCGCCGCTAG 495 0.4828 MDREGGSNGGSCYYSVLGIRRDASFSDIRTAYRNLALKRWHPDRWARNPAIAGEAKRRFQQIQEAYSVLSDQSKRSMYDAGLYDPLEEEDQEFCDFMQEMISMMNNVKDEGDSLEDLQRMFMEMVGGDGMSFEVKEDQSGCKRHRVSTPRGNTAKRSNSANSRR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3843 164 PANTHER PUTATIVE, EXPRESSED-RELATED 9 149 - -
Sto13g3843 164 CDD DnaJ 12 71 IPR001623 -
Sto13g3843 164 PANTHER PUTATIVE, EXPRESSED-RELATED 9 149 - -
Sto13g3843 164 SUPERFAMILY Chaperone J-domain 12 85 IPR036869 -
Sto13g3843 164 PRINTS DnaJ domain signature 14 32 IPR001623 -
Sto13g3843 164 PRINTS DnaJ domain signature 33 48 IPR001623 -
Sto13g3843 164 PRINTS DnaJ domain signature 54 74 IPR001623 -
Sto13g3843 164 SMART dnaj_3 11 74 IPR001623 -
Sto13g3843 164 ProSitePatterns Nt-dnaJ domain signature. 59 78 IPR018253 -
Sto13g3843 164 ProSiteProfiles dnaJ domain profile. 12 82 IPR001623 -
Sto13g3843 164 Pfam DnaJ domain 13 79 IPR001623 -
Sto13g3843 164 MobiDBLite consensus disorder prediction 133 164 - -
Sto13g3843 164 Gene3D DnaJ domain 2 105 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3843 Sto-Chr13 39800582 39801775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3843 12 80 C2H2 Transcription Factor Family AT1G74250 44.286 1.84e-13 65.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3843 13 39800582 39801775 Sto13g3843 13 39800582 39801775 ECH