Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3841 ATGGCATCACAAAGACAATCTCAGGAGGAGGGTAATGACAAGAATCGTCTAGTTGCTGTTAAAGACAACTCCAAGCGAAGACATGGGAGCTTAAGGCAAGCAGAAATACGCGTCATTAGGAGTATGATGAGAGGACGGAGGATGAATGACATAGGCTTCTACATCGAACCCTTACTTCgaaaaTTACAAGAGGAGCTTCCAACTATAATTGAGCGGCATCGACAACTATTCCCTggTAGGATAATGATGTGTGCGCTAAACGGTGAGTTTGGTGGCGATGAGAGTGAGGATTGGAGTGCAGAGGAATTCAACGCCAATATCTCACCTCGCAGAGAGGGGAAAGGCCAATTACTGAGTGGAGATCATAGGTTCGTCACATTAGAGAATGGAGTTGCTTTTGTATCAGACATTGAGTTTACCGACAGTTCGTGCTGGACTAGAAGCCGCAGGTTCAGGTTAGGAGCCAAAGTTGTGCAGAATAATGAGGCAAACGTTATTAGGGAAGGCAGAAGTGAAGCTTTTGTGGTGAAGGATAAACGTGGAGAGcCTTACAAGAAACATGACTATCCATCACTGGACGATGAGATATGGCGTTTGAAAAAGATAGCAAAAGACGGGAAAATTCACAAGCAGCTATTGTCGTATCAAGTAAAAACCGTGAAGGATCTGTTGCGCTTGTACGTAACCGACCCTTTTTCATTACAAAAGAAAATGGGCAACATTGCAAAGAAGTCGTGGGATACAATAATTGAGCATGCCCAGCTGGCTTGCCGCACAGACGACGAGAATCGTTACATCTATCACTATCAAACAATGGCCCTTATCTTCACTTCCATCTATAAGCTTGTGGAAGTGAGTTTTGATGGCGGCCATAATTATCGGTCTCTAGAATCTCTAAACTCGGAAGAAAAGCGTGTGGTGGAAAGAGCTAAGCAGAAAGCTTACGAGAATTTGAGAGATTTGGTAGCAGTGGAGACATCAGCAGCAGGCCATGGCCAACCTTCCACATCTACATCATTTGTTGGTGAagaaatcatgcataatgatcATGAGCAAATAATGCAGCTCAACAGTAGTTGTGGATTATTCAATATTATTGATGATGATGGAGATGCAGGATCATGGAACCTTAATGGATCTCAGATTCAACTGCCAAATTATGTTTCTCCTCCTTCGCCATGGAGCATGGGGCTAGCAAATCCCTATGGTTTTGGTATTCCTTATGGTGATCATGTGGGCGCAGCAGATTTTAGCTATCATTCATCTAATAATTTCCTCCATTATTCTTCAAGCACAGGCAAACGCAAAAGTACTGTTTGGAATAAGATTCGAAATGCTCTTAAATTGGTCATACCCTTTGTGGCTAAGAGCAGGAAGGCAAAGCTTTCCATTCCCTGCAAGGATGTAGCTATTACACTCTAG 1422 0.4248 MASQRQSQEEGNDKNRLVAVKDNSKRRHGSLRQAEIRVIRSMMRGRRMNDIGFYIEPLLRKLQEELPTIIERHRQLFPGRIMMCALNGEFGGDESEDWSAEEFNANISPRREGKGQLLSGDHRFVTLENGVAFVSDIEFTDSSCWTRSRRFRLGAKVVQNNEANVIREGRSEAFVVKDKRGEPYKKHDYPSLDDEIWRLKKIAKDGKIHKQLLSYQVKTVKDLLRLYVTDPFSLQKKMGNIAKKSWDTIIEHAQLACRTDDENRYIYHYQTMALIFTSIYKLVEVSFDGGHNYRSLESLNSEEKRVVERAKQKAYENLRDLVAVETSAAGHGQPSTSTSFVGEEIMHNDHEQIMQLNSSCGLFNIIDDDGDAGSWNLNGSQIQLPNYVSPPSPWSMGLANPYGFGIPYGDHVGAADFSYHSSNNFLHYSSSTGKRKSTVWNKIRNALKLVIPFVAKSRKAKLSIPCKDVAITL 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3841 473 Pfam Calmodulin binding protein-like N-terminal domain 72 179 IPR046831 -
Sto13g3841 473 Coils Coil 293 313 - -
Sto13g3841 473 MobiDBLite consensus disorder prediction 9 29 - -
Sto13g3841 473 Pfam Calmodulin binding protein C-terminal domain 264 322 IPR046829 -
Sto13g3841 473 Pfam Calmodulin binding protein central domain 191 254 IPR046830 -
Sto13g3841 473 PANTHER OS02G0177800 PROTEIN 80 456 IPR012416 GO:0005516
Sto13g3841 473 PANTHER CALMODULIN-BINDING PROTEIN 60 G 80 456 - -
Sto13g3841 473 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3841 Sto-Chr13 39782705 39785067 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3841 57 335 Calmodulin-binding Proteins AT5G26920 39.437 3.06e-55 188