Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3836 ATGGAGACCGAAAAGAGACGTTCCAAGGGAGGGTTTCTCAACTTGTTTGATTGGAATGGAAAATCTCGAAAGAAGCTATTCAATGACAATCCTAACATACCTGAAGTTTCAAAGCAAGGGAAGGAAAATGCGGAGAACATGGAAAATACACAGCTCAATAGGATACATGTGGATGAGAATGGAGCAGGCCCAAGTTACACAGCAAATTGTGATTTTAGTGGCACGTTATCAACGAATAGTGATGAAGGATGTGGCACCAAAGCCCCTGGGTTAGTGGCAAGACTGATGGGTTTGGATTCATTGCCTTCTTCAGCAGCTGCTGAACTCTCATCTGCTACATTATATGGCTCTAATTCTCTTGGATCTTGTCATGAGGCTGCTTTTGGTTCGACAAATGACTATCTACCTGTGGAATACATAAACATGCCGCTTAATCTTGAGAAGTCTTTGAGGGATGCCACGGAGTCGAGGGCACAAAAAGTGGGAAATCGGCCAATCAAGAGATTTCAAACTGAGGTATTGCCTCCAAAGTCAGCTAAACCAATTCCTGTTACTCACAATAAACTCTTATCTCCTATCAAGAGTCCCGGTTTTATCCCTCCGAAGAATGCAGCTCACATAATGGAGGCAGCTGCAAAGATATTTGAGGCAAGCCCCCGGCCATATATGAAGAACAATATGTCATCAGCCGGGCCTTCATCTGTTCCCTTGAGAATTCTTAGTTTGAAAGAGAAATTGGAAGCTGCACAGTGTGCATCCATGCCTGAAAAGCCCATGGATTCAATTGCTACAAATCATGTTAAAGGAAGGCCTAGTGGCAGGAGCAATAATTCTTATAAAAGCACTTCGGCATTCAAGATTTCAAGAGATTCAGAAAAAACTAGTTCTTACCATTTGGGAACTAAAGGAAAATCAGTTTCACTTGCAACACAATCCAAGGCCAACGTTCAGAGCAAAGATACATTGACTTCAAATGGTGGTAGGGGACATATGAAGCATAAAGAACAGAGTGAGATTAGATCAAACCAGTTCTCCAGGAGCCAGAAACCAACTATACAGCAATCCATGCAGCAGAGAACTTCTACAGGCCGGAATAGCACTGTGCTTGGGCAGAACAACCAAAAGCAGAATATTGTAGCCAACAGAGTTACATCAACTTCTAGAATTGATTCCAACAAGCCAACTACACGAGTTCGATCTGCAGAAAATTCCACTGGGGCAAAGAAGACAACAAATGAGGGTTCTGTCAATGCAAATAATGGGCCGAAAAGGTCAAACAGAAGGGCAGCTGATACTCAAAAGGAGTTTCCACTATCCAAGACAAAGAGTGTAGCCCAAAAGAAAAGGTATGTCAGTAGGGGTGTTTATGACGGGGCAAGAGATCCAAATAAAGCggtaaataattatgaaaataagtCCATAAAATGCAATATTACTACTGATGGAAGTATGAATCAGGATGTGTTTAACATGCAAGAAGGCAAGGAtgttatttcattcacatttaCATCTCCCTTGAGGAGAAGCTTGCCTGAGTCACAGTCCTCTACTCAAGTGATGGGAACAAAGGACAATACTGTTGTCACTTCTCTTGGTCAAAGTGATAAGCTTTGTCCTGAAAAATTGTCATTATCTCCTCCTGGATTACACAAGATAGATGGCGATGTTTTAAGTGTCCTGTTGGAGAAAAAGCTGCAAGAATTGACATCTATAATTAACATACCTCAAGATACTCTGGTTATAGAGGGATCTTCTGCTGGTTTACAGTGTAATTTGCAAGACAAAACGACTAGTGTGGTAAGTGCCATGTCAAGGGAACCAGACAAAAGCTTTCACACTGACCTGCATAGTGATAATTTACATGGCATGCACGACTATGGTTGTTCTTCAAGCGATGATCTGGTGCATAACTTAAATTCACAGCTGCAGACATTAGAAGGAGCAGAAGAGCCCAGGTGTTCCAGCAATGGTGAACCTGGAAATGATCCAGGTAGTCTACATTCCAGATCTGTCACAGTTTTTGAAACTCCTTGTGTCAGTAGCACAGTTTATTCATCCATGCAAGATGAAGAAGTATCCAACTTTTCTCCAATAAATGAATATGAACCAATTGAAAATGGAGTGAATTGGTCTGACAGAAGCTCTTCCATGAAACAATTAAGTAGTACATCGAATTTGGCAGATTTTAAAATGTCAGGGAACACAGAACTTGAATATGTGAAAGATATACTTAGCAATGCAGAGTTGATGGCAGAAGATTTTGTTCTGGGTCAAACCAATAAGATCATAATGTCAAATCACTTTGATGCGTTGGAAAATCAGAACAGTGGGAGTGAAAACTGTGAAGAAGAGGAGTCCAAGCTAGAGAGAAAGGTTTTGTTTGACTGTGTAAGTGAGTGCCTGGAATTGAGATGCAATAAAGCTTTTGTTGGATGCTGCAAAGCTTGGCCTAGATGGATTGAATTGGATCATAGGAAAGGCTGGTTGGCAGAAGAACTGTACAATGAAATTCTGGGTTTCAAAAGCATGGAGGAGGTAATGGTAGACGAGCTTGTCGACAAGGACATGAGCAGTCGATATGGTAGATGGCTTGACTTTGACTTGGAAGCCTTTGAAGAGGCTTTAGAGATTGAGTGGGAAATATCAACTTGTTTGATTAATGAATTAATATCTGATTTGTTACTTGTTTAA 2691 0.4062 METEKRRSKGGFLNLFDWNGKSRKKLFNDNPNIPEVSKQGKENAENMENTQLNRIHVDENGAGPSYTANCDFSGTLSTNSDEGCGTKAPGLVARLMGLDSLPSSAAAELSSATLYGSNSLGSCHEAAFGSTNDYLPVEYINMPLNLEKSLRDATESRAQKVGNRPIKRFQTEVLPPKSAKPIPVTHNKLLSPIKSPGFIPPKNAAHIMEAAAKIFEASPRPYMKNNMSSAGPSSVPLRILSLKEKLEAAQCASMPEKPMDSIATNHVKGRPSGRSNNSYKSTSAFKISRDSEKTSSYHLGTKGKSVSLATQSKANVQSKDTLTSNGGRGHMKHKEQSEIRSNQFSRSQKPTIQQSMQQRTSTGRNSTVLGQNNQKQNIVANRVTSTSRIDSNKPTTRVRSAENSTGAKKTTNEGSVNANNGPKRSNRRAADTQKEFPLSKTKSVAQKKRYVSRGVYDGARDPNKAVNNYENKSIKCNITTDGSMNQDVFNMQEGKDVISFTFTSPLRRSLPESQSSTQVMGTKDNTVVTSLGQSDKLCPEKLSLSPPGLHKIDGDVLSVLLEKKLQELTSIINIPQDTLVIEGSSAGLQCNLQDKTTSVVSAMSREPDKSFHTDLHSDNLHGMHDYGCSSSDDLVHNLNSQLQTLEGAEEPRCSSNGEPGNDPGSLHSRSVTVFETPCVSSTVYSSMQDEEVSNFSPINEYEPIENGVNWSDRSSSMKQLSSTSNLADFKMSGNTELEYVKDILSNAELMAEDFVLGQTNKIIMSNHFDALENQNSGSENCEEEESKLERKVLFDCVSECLELRCNKAFVGCCKAWPRWIELDHRKGWLAEELYNEILGFKSMEEVMVDELVDKDMSSRYGRWLDFDLEAFEEALEIEWEISTCLINELISDLLLV 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3836 896 MobiDBLite consensus disorder prediction 253 445 - -
Sto13g3836 896 PANTHER DUF4378 DOMAIN PROTEIN 1 896 - -
Sto13g3836 896 MobiDBLite consensus disorder prediction 644 669 - -
Sto13g3836 896 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 896 - -
Sto13g3836 896 Coils Coil 771 791 - -
Sto13g3836 896 MobiDBLite consensus disorder prediction 326 340 - -
Sto13g3836 896 MobiDBLite consensus disorder prediction 341 426 - -
Sto13g3836 896 MobiDBLite consensus disorder prediction 298 325 - -
Sto13g3836 896 Pfam DUF761-associated sequence motif 77 104 IPR032795 -
Sto13g3836 896 MobiDBLite consensus disorder prediction 268 290 - -
Sto13g3836 896 Pfam Domain of unknown function (DUF4378) 736 888 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3836 Sto-Chr13 39755648 39759556 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3836 3 894 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 33.444 5.85e-108 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3836 - - gmx:102663635 979.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3836 13 39755648 39759556 Sto13g3836 13 39755648 39759556 ECH