Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3832 ATGGCTCACACCAGCAACAATGTCGCTGGGGTTGACAACACGTTCAGAAGGAAATTTGATCGAGAAGAGTATTTGGAACGAGCACGAGAGCGTGAGAGACAGGAGGAAGAGGCACGATCCAGACCTAAATCCAAAGGTCCCCCAGTGCAGAGGAAACCCTTGAAACATAGAGATTATGAAGTGGACCTTGAATCTCGCTTGGGGAAGACTCAGGTTGTTACTCCAGTTGCACCACTAAGCCAGCAGGCTGGATACTACTGCTCAGTTTGTGAGTGTGTGGTAAAGGATTCTGCTAACTACTTGGATCATATTAATGGAAAGAAGCATCAACGAGCACTGGGAATGTCTATGCGAGTGGAACGTGCTTCTCTTGGACAGGTTCAGGAACGATTTGAAGTTCTTAAAAAACGTAAAGCTGTTGGCAGCTTTACAGAGCAAGATCTTGATGACCGGATCTTAAAACAGCAacaggaggaggaagaaagaaagcgACAGCGTcgagaaaggaaaaaggaaaagaagaaggaaaaagaagttgaAGAAGCACCTGAAACAGATCCTGATGTTGCAGCAATGATGGGATTTGGTGGTTTTCGGTCATCCAAGAAATGA 612 0.4118 MAHTSNNVAGVDNTFRRKFDREEYLERARERERQEEEARSRPKSKGPPVQRKPLKHRDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLGQVQERFEVLKKRKAVGSFTEQDLDDRILKQQQEEEERKRQRRERKKEKKKEKEVEEAPETDPDVAAMMGFGGFRSSKK 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3832 203 MobiDBLite consensus disorder prediction 151 203 - -
Sto13g3832 203 Coils Coil 21 41 - -
Sto13g3832 203 MobiDBLite consensus disorder prediction 20 57 - -
Sto13g3832 203 SUPERFAMILY beta-beta-alpha zinc fingers 80 119 IPR036236 -
Sto13g3832 203 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 7 203 IPR040107 GO:0000398|GO:0005681
Sto13g3832 203 SMART ZnF_U1_5 82 116 IPR003604 GO:0003676|GO:0008270
Sto13g3832 203 Gene3D Classic Zinc Finger 79 117 - -
Sto13g3832 203 MobiDBLite consensus disorder prediction 151 184 - -
Sto13g3832 203 Pfam Zinc-finger of C2H2 type 85 109 - -
Sto13g3832 203 MobiDBLite consensus disorder prediction 20 44 - -
Sto13g3832 203 Coils Coil 153 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3832 Sto-Chr13 39742191 39744645 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3832 4 147 C2H2 Transcription Factor Family AT3G05760 81.944 5.08e-85 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sto13g3832 zf-C2H2_jaz 1.9e-06 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3832 13 39742191 39744645 Sto13g3832 13 39742191 39744645 ECH