Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3805 ATGGGGAGTAGTGGGGATCTGATTCCAGTATTGGCCATGGTCATAGTGCAGCTTGGGTATGCAGGCATGAATATTACCTCAAAGCTTTCCATACAATCTGGCATGAACCCTCTTGTTCTTGTGGCTTATCGTCAACTCTTTGCCACTACAATCATTGCTCCCTTCGCCTTTTGGCTTGAACGAAAATCCGATTGCAAGATGACACGGCCcatattttttcaaatattacTATGTTCCTTGACAGGAGTTACAGGAAATCAGATACTGTATTTTGTGGGGTTAAAATACTCAACAACTACAGTGGCATGCGCTCTAACTAATTTGCTCCCAGCCTTCACGTTTATTCTTGCGGTGGTATTCAGACAAGAGTACGTGAGAATGAAGACGAAGGCGGGGCAAGCAATGGTGTTTGGTACTGTTTTGGGTGTGGGTGGAGCCCTTTTCCTATCCTATTACCACGGGAAAACCATCAATTTTGGGCAATCTGGGATTCACTGGGAATACGCAGAGAAAATAGAAAGATCTAGCCCCACCTCCAACACAAATTCGTTTCTAGGCCCTGTGTTTTTAATTGCTAGTGCTCTTGTTTGGGCACTATGGTTCATCATCCAGGCAGACTTGAGCAAGAAATATCCAGCTCCTTATACCAGTACCACCTACATGTGCTCTATGGCAAGCATAGAATGTGTCGCCATTGCTTCTTGCTTTGAACACAGACTCTCAGCTTGGTCTCTCTCCAATTCTATGAGACTCATCTCTGCAGTTTATgcgGGTGTCGTTTGCACGGGGCTAGCGTGTTGCCTAATGTCGTGGACAATAGAGAAGAAAGGTGCTCTTTATGTCTCTGTATTCAGTCCCTTGCAGCTTGTCATCACTGCTTTGATCAGTTGGGCAGTGCTTCGGGAGAAGTTATATATTGGAACTGTGGCAGGGTCCGTCCTTATAATTTTGGGGCTGTATTCTGTTTTGTGGGGAAAGAACAGGGAGAAGAATGAAAGTGACGTTATTCAAGAGACGGAGGCTATAAAGGAGAAGGATGCGAGGATCGACCTGGAGCTGCAAATTCAATAA 1071 0.4444 MGSSGDLIPVLAMVIVQLGYAGMNITSKLSIQSGMNPLVLVAYRQLFATTIIAPFAFWLERKSDCKMTRPIFFQILLCSLTGVTGNQILYFVGLKYSTTTVACALTNLLPAFTFILAVVFRQEYVRMKTKAGQAMVFGTVLGVGGALFLSYYHGKTINFGQSGIHWEYAEKIERSSPTSNTNSFLGPVFLIASALVWALWFIIQADLSKKYPAPYTSTTYMCSMASIECVAIASCFEHRLSAWSLSNSMRLISAVYAGVVCTGLACCLMSWTIEKKGALYVSVFSPLQLVITALISWAVLREKLYIGTVAGSVLIILGLYSVLWGKNREKNESDVIQETEAIKEKDARIDLELQIQ 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3805 356 PANTHER WAT1-RELATED PROTEIN 8 348 IPR030184 GO:0016021|GO:0022857
Sto13g3805 356 Pfam EamA-like transporter family 8 143 IPR000620 GO:0016020|GO:0016021
Sto13g3805 356 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020|GO:0016021
Sto13g3805 356 PANTHER WAT1-RELATED PROTEIN 8 348 - -
Sto13g3805 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 143 - -
Sto13g3805 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3805 Sto-Chr13 39602540 39604389 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3805 6 327 Nodulin-like Gene Family AT1G09380 59.133 7.27e-140 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3805 - - gmx:100801512 474.937