Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3799 ATGGGCGGAGGTGGAGCGACGTCGTCTTACGCGGAGCCGCAGTACGTCTCGGCTAAGACATCGGTGTGGTGGGACATAGAGAACTGCCATGTTCCCAAAGTATGCGATCCCCACGCCATCGCTCAGAACATTAGTTCAGCGCTTGTTAAGATGAACTATTCTGGGCCGGTTTCCATCTCCGCCTATGGCGATACCACTCGCATCCCAGCCTCTGTACAGCACGCGCTTTCCAGTACCGGCATCTCCCTCAACCATGTTCCCGCCGGTGTTAAAGATGCTAGCGATAAGAAAATTCTTGTGGACATGTTGTTTTGGGCTGTGGACAATCCTGCACCtgctaattatttattaatttctggTGATCGAGACTTTTCTAATGCTCTTCATCAATTGAGGATGAGGAGATATAATATTCTTCTTGCACAGCCTCAGAAAGCATCTGCGCCGCTTGTTGCAGCTGCCAAGAGTGTATGGCTTTGGACTAATCTCATAGTTGGAGGAGCTCCTCAACCTAATGGTGAATCATATCCACTAGGAAATAATAACCTCCTATCAAGTTCTGACACCTTACAAATTCCAGTCTCTAATGGTGTTCAGATGAAGCAACAAGTGGATTATTCTCAAGTTCATACAGGTAACCAGAAACATCCAAATACAGGAAGGGGATTTGATTCTAGATACCAGGGGAAAACAAATTGGAGAAACACTAGTCAACCAAATGGACTGAATTCTATGAATCCACCTGTTGGACTACAAGAAAATCATAACAATATAAACTCTTATCGTCCTGGTAACCAAAACCCAAGCTTACCCCTATGTGGATCTGCTCCTAATTTGGCTCATGGCCGTTCTGATCAGATGTGGAGCAATAACGGCAATCTCCAGGGAAATTATCAAAATCCATCACAGTCATTAAGACCGAATGGCTTTCCTTCTCAACCTGCTCTTTCATCAAGTAATTCATATCCACCTAATTTGCACACCTTTCCAACTTCAACAGTGCCTCATAGGGGTAGTGGACCTAACTTCACCTCTGTACCATTTACAAATGTGCCTGATATTGGTAAAATGAATATTTCGGGATATCCCAACAATGGTCATCATTCATCTACTGTTCAGCAACGGAGTGGAGACATGAAACAGAATCCTAGCCAAAATGCTCCTCAACCTGTAAGGCCAACTGACGAACAAAATGGGCATATGATACATAGCACACAACAGTTATACCATGGTTACCCTCAAGGTCCCACATACCCCCCCACTTCTTTGGCAGCAATGGGTGATAATAATCTTCCAGGTAATAGTATGTGGGGATCTCATGGATGCCCTAAACCATCTGAATTTGTGCAGGGTCTTATAGGGATTGTATTACTTACCTTGAACACACTAAAAAATGAGAAGATTATGCCAACTGAGACAAATATAGCTGATTGCATTCGTTATGGAGATCCAAAGCATCGCAACACTGATGTTAAGAAAGCTCTGGAGAGTGCTGTTGCACAGCAGATGGTGGTAAAACAGAATTTAGGTGCTTTGCAATTTTATATTGGTAAGAAAGATAAACTCTGGAAGTGTGTGAACCCTATCGGTGGTAATCCTAAGCAGCACTCAAAAGAAATTTGGGATGAAGTTCAGAAATTTATAGCAACACCTTCTGGAAGATCAGCAATAATGGGCACTCAGTGCAGGTATGAAGCGGCTACTCTTATAAGGAATATGTGCTTAAAAAATCTTGCTTTGGGCAATGTCCTTCAGATTTTGAACCTGGTTATAACCCATAAAAAATGGATTGCGAATGACCAGTCAGGTTGGCAACCACTTAAAATTACTCTTGCTGAAATCAATTCTGGTTCAGGGGTCATAGCTAGCACATAA 1875 0.4261 MGGGGATSSYAEPQYVSAKTSVWWDIENCHVPKVCDPHAIAQNISSALVKMNYSGPVSISAYGDTTRIPASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTNLIVGGAPQPNGESYPLGNNNLLSSSDTLQIPVSNGVQMKQQVDYSQVHTGNQKHPNTGRGFDSRYQGKTNWRNTSQPNGLNSMNPPVGLQENHNNINSYRPGNQNPSLPLCGSAPNLAHGRSDQMWSNNGNLQGNYQNPSQSLRPNGFPSQPALSSSNSYPPNLHTFPTSTVPHRGSGPNFTSVPFTNVPDIGKMNISGYPNNGHHSSTVQQRSGDMKQNPSQNAPQPVRPTDEQNGHMIHSTQQLYHGYPQGPTYPPTSLAAMGDNNLPGNSMWGSHGCPKPSEFVQGLIGIVLLTLNTLKNEKIMPTETNIADCIRYGDPKHRNTDVKKALESAVAQQMVVKQNLGALQFYIGKKDKLWKCVNPIGGNPKQHSKEIWDEVQKFIATPSGRSAIMGTQCRYEAATLIRNMCLKNLALGNVLQILNLVITHKKWIANDQSGWQPLKITLAEINSGSGVIAST 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3799 624 MobiDBLite consensus disorder prediction 362 398 - -
Sto13g3799 624 Gene3D - 14 163 - -
Sto13g3799 624 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 2 608 - -
Sto13g3799 624 Pfam OST-HTH Associated domain 561 616 IPR025677 -
Sto13g3799 624 CDD PIN_limkain_b1_N_like 19 143 - -
Sto13g3799 624 MobiDBLite consensus disorder prediction 357 398 - -
Sto13g3799 624 Pfam NYN domain 19 155 IPR021139 GO:0004540
Sto13g3799 624 PANTHER LIMKAIN B LKAP 2 608 IPR024768 GO:0005777|GO:0010468|GO:1903231
Sto13g3799 624 MobiDBLite consensus disorder prediction 282 342 - -
Sto13g3799 624 MobiDBLite consensus disorder prediction 208 342 - -
Sto13g3799 624 MobiDBLite consensus disorder prediction 208 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3799 Sto-Chr13 39563567 39565970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3799 9 199 C2H2 Transcription Factor Family AT5G61190 69.948 1.37e-80 273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3799 13 39563567 39565970 Sto8g0299 8 1940401 1943179 ECH
Sto13g3799 13 39563567 39565970 Sto13g3799 13 39563567 39565970 ECH