Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3795 ATGGACAATCGATGGACCAAGAGTAGGCAGGAAACTGGTGCCCGTGACAGAAGGCAATTTCGAAAGGAGCAGACATATCAAGACTCCCTCATTGAAGATATGGCAGAGGATTTCCGTTTGCCAATCAACCAAAGGCCAACAGAAAATGTTGATCTGGATAATGTAGAACAAGCATCTCTAGACACTCAGTTAACATCGTCAAATATTGGATTCAAGCTTCTCCAAAAGATGGGATGGAAAGGGAAGGGTCTTGGGAAGAATGAGCAAGGAATTATTGAACCTATAAAATCTGGGATGAGAGATCCAAGATTGGGGGTAGGTaaacaagaagaagatgattTTTTCACTGCAGAAGAAAATATCCAGCGAAGAAAACTTGATGTTGAGTTAGAGGAGACAGAGGAAAATGCAAGGAAGCGAGAGGATGGGCATGTCATAGGGAACCATCAACTTTGGAAGGTCTTGAGAATTTCCTGCAGTTTTTATTACCTGGTGGCTTCTTCTGCCTGCTTCGTGCACATTATGAAAATCCAGGTCTTAGCAGAACGTGAGCAAAAAATTCAAACTGAGGTGAAAGAAATACGGAAAGTGTTTTATTGTGATCTCTGCAACAAGCAATACAAATTAGCAATGGAATTTGAAGCACACCTGAGCTCGTATGATCACAATCACAGAAAGCGCTTCAAAGAAATGAAGGAAATGCATGGTAGTAGTAGCCGGGATGATAGGCAAAAGCGAGAACAGCAACGTCAAGAGAGAGAAATGGCTAAGTTTGCTCAAATAGCTGATGCTCAAAAGCAACAACAGATTCAACAGCAACAGGAAGAAACTGGGACTGCTCTAGCTTCCTCTGAATCTAGATCTGCTACTGCACTTGCTGATCAGGAACAGCGGAAGACACTGAAGTTTGGGTTTTCTTCTAAAGGTGGTGCTTCCAAGAACACGTTTGGTGGATCTGCAAAGAAGCAAAAAGTTGCTGTGTCCTCTGTATTTGGCAATGATACTGATGAAGAATAG 1017 0.4169 MDNRWTKSRQETGARDRRQFRKEQTYQDSLIEDMAEDFRLPINQRPTENVDLDNVEQASLDTQLTSSNIGFKLLQKMGWKGKGLGKNEQGIIEPIKSGMRDPRLGVGKQEEDDFFTAEENIQRRKLDVELEETEENARKREDGHVIGNHQLWKVLRISCSFYYLVASSACFVHIMKIQVLAEREQKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMKEMHGSSSRDDRQKREQQRQEREMAKFAQIADAQKQQQIQQQQEETGTALASSESRSATALADQEQRKTLKFGFSSKGGASKNTFGGSAKKQKVAVSSVFGNDTDEE 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3795 338 ProSitePatterns Zinc finger C2H2 type domain signature. 200 222 IPR013087 -
Sto13g3795 338 SMART G-patch_5 64 109 IPR000467 GO:0003676
Sto13g3795 338 MobiDBLite consensus disorder prediction 262 295 - -
Sto13g3795 338 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 338 - -
Sto13g3795 338 ProSiteProfiles G-patch domain profile. 66 111 IPR000467 GO:0003676
Sto13g3795 338 SUPERFAMILY beta-beta-alpha zinc fingers 196 229 IPR036236 -
Sto13g3795 338 Pfam Zinc-finger double-stranded RNA-binding 198 225 IPR022755 -
Sto13g3795 338 MobiDBLite consensus disorder prediction 231 259 - -
Sto13g3795 338 Coils Coil 116 136 - -
Sto13g3795 338 MobiDBLite consensus disorder prediction 231 338 - -
Sto13g3795 338 MobiDBLite consensus disorder prediction 1 27 - -
Sto13g3795 338 MobiDBLite consensus disorder prediction 307 330 - -
Sto13g3795 338 Pfam G-patch domain 67 107 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3795 Sto-Chr13 39549821 39552528 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3795 1 338 C2H2 Transcription Factor Family AT5G26610 58.944 5.81e-122 351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3795 13 39549821 39552528 Sto13g3795 13 39549821 39552528 ECH