Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3783 ATGGATTCATTAACGTTTGGAGCTCCTAGATTTCTTCGCCATTTAATGGATCCTAGCTCAAAGAAAGTTCCAGTGGTGGAATTTGATGTTGCAAAGATTTTGGACGAGCTACATCTGACCATGGATCAATTTATTGACTTATGCATTCTTTCTGGGTGTGATTATTGTGAAAACATTCGAGGTATTGGTGGGAAGACAGCTTTGAAGCTCATTCATCAACATGGATCTCTAGAGAATATACTGGAGAACATAAACAGAGACAGGTATCAAATACCAGATGATTGGCCATATCAGGAGGCTAGGCGGCTTTTTAAAGAACCAGTAGTCTTAACTGAAGAAGAGCAACTTGATCTTAAGTGGACTGCTCCAGATGAAGAAGGCTTAATTACGTTTCTGGTAGATGAGAATGGATTCAACAGTGGTAGGGTGTCAAAGgcaatacaaaaaattaaagatttcaAGAACAAGTCATCACAAAGACAACTGGAACTATCGTTTAAGCCAGTTGTCAATGCCTCTGCACCCATAAAACCGAAGCCATCTGCCTCGAGATTTATAGCCGCATGTCACTTGGTGTATCAAGATCCACGCCCAGTGGTTTTGTTGCCGGGGTATATTCTGTTCTGGTTTGAAACAGAATTATCCACGTCTTTGACCAGCAGCAAATTGAAATGCATTATCATTCTGATTGAGATACTCTTACCTCAGTAG 711 0.3966 MDSLTFGAPRFLRHLMDPSSKKVPVVEFDVAKILDELHLTMDQFIDLCILSGCDYCENIRGIGGKTALKLIHQHGSLENILENINRDRYQIPDDWPYQEARRLFKEPVVLTEEEQLDLKWTAPDEEGLITFLVDENGFNSGRVSKAIQKIKDFKNKSSQRQLELSFKPVVNASAPIKPKPSASRFIAACHLVYQDPRPVVLLPGYILFWFETELSTSLTSSKLKCIIILIEILLPQ 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3783 236 SUPERFAMILY PIN domain-like 1 54 IPR029060 -
Sto13g3783 236 CDD H3TH_FEN1-Euk 42 110 - -
Sto13g3783 236 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 180 IPR006084 -
Sto13g3783 236 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 39 169 IPR036279 -
Sto13g3783 236 SMART HhH_4 41 74 IPR008918 GO:0003677|GO:0003824
Sto13g3783 236 Gene3D - 39 106 - -
Sto13g3783 236 PANTHER FLAP ENDONUCLEASE 1 1 180 - -
Sto13g3783 236 Pfam XPG I-region 1 54 IPR006086 GO:0004518
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3783 Sto-Chr13 39481305 39483678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3783 1 181 Core DNA Replication Machinery Family AT5G26680 74.586 3.29e-101 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3783 K04799 - qsu:111997677 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3783 13 39481305 39483678 Sto13g3783 13 39481305 39483678 ECH