Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3743 CTGTTGGCAGCCGTGAACAACGGAGGAGTTAAGCCCAACGTGGTGGTTGCCAAGGACGGAAGTGGCCAATTTAAGACGGTTCAGGAAGCTGTTGACTCATACCCCAAAAAGCATCAGGGAAGATATGTTATTTACGTCAAGGCTGGTGTGTACGATGAGATCGTTAAGGTTAACAACAAGAAGACCAACCTTCTCATCTACGGCGATGGCCCTACAAAGACCATCATCACTGGCAAAAGGAGCTACAAATCCGGATGGAAGACCATCAATACCGCCACCTTCACCACCACCGCTGATGATTTCGTTGCCAAGTCAATTGCATTCGAGAACACGGCTGGACCTTCAGGGCATCAGGCAGTTGCACTGCGCGTGATGGGTGATCGTTCCGCTTTCTTCGACTGTGCCATGCATGGTTACCAAGACACCCTATACGCACACGCCAAGCGCCAATTCTACCGCAACTGTGAAATCTCGGGCACAGTGGATTTCATCTTCGGCTACTCCAGCACTTTGATCCAGAACTCCAGGATCATTGTGAGGAAGCCCAATGCCAATCAGCAAAACATCGTGGTAGCCGACGGCACAGCTCAGAAGAACATGCCCTCCGGAATTGTTCTTCAGAACTGCCAGATCATGCCTTCTCCTGACCTCCACCCCGACAGGCTCACCGTCAGGTCCTATCTGGCAAGGCCATGGAAGGCATACTCCAAGGCCATCTTCATCCAGAACAGCATCGGTGACCTTATCCAGCCTGAAGGATTCCTTCCATGGATGGGCACCATGTACCTTGACACGTGCTACTTCGCTGAGTTTGGAAACACGGGTGCGGGTTCGGGTGTGGATAAGAGGGTCAAGTGGAGCCGTGGACTGCTCACCAAGGCTGATGCTGCTCATTACACTGCCGAGGAATGGCTTAAAGCTAGCACTTGGTTGCCTGCCACTGGCGTTCCTTTCACTGCTGGCTTCACCGCTTAG 975 0.5241 LLAAVNNGGVKPNVVVAKDGSGQFKTVQEAVDSYPKKHQGRYVIYVKAGVYDEIVKVNNKKTNLLIYGDGPTKTIITGKRSYKSGWKTINTATFTTTADDFVAKSIAFENTAGPSGHQAVALRVMGDRSAFFDCAMHGYQDTLYAHAKRQFYRNCEISGTVDFIFGYSSTLIQNSRIIVRKPNANQQNIVVADGTAQKNMPSGIVLQNCQIMPSPDLHPDRLTVRSYLARPWKAYSKAIFIQNSIGDLIQPEGFLPWMGTMYLDTCYFAEFGNTGAGSGVDKRVKWSRGLLTKADAAHYTAEEWLKASTWLPATGVPFTAGFTA 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3743 324 PANTHER PECTINESTERASE 8 322 - -
Sto13g3743 324 SUPERFAMILY Pectin lyase-like 10 321 IPR011050 -
Sto13g3743 324 PANTHER PECTINESTERASE 8 322 - -
Sto13g3743 324 Gene3D - 7 322 IPR012334 -
Sto13g3743 324 Pfam Pectinesterase 13 307 IPR000070 GO:0030599|GO:0042545
Sto13g3743 324 ProSitePatterns Pectinesterase signature 2. 157 166 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3743 Sto-Chr13 39261519 39262570 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3743 8 322 Carbohydrate Esterase AT5G49180 49.057 4.10e-105 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3743 K01051 - gmx:100820142 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3743 13 39261519 39262570 Sto8g0362 8 2296853 2298612 CCT