Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3742 atGAATGGGAAAGTACTAGTATCAGCAGTTTCCATCATCCTGGTGGTGGGGGTTGCCATCGGCGCCGTGGTGGTAGTTCGAAACAAGAGCAATGAGTCCGGCATCTCCGCTCATCAGAATACGGTGATGACAATGTGCCAGAACACACAAGACCAAAAGCTCTGTCACGAAACTCTAAGCTCCGTGAAGGTAAACGACACGTCAGACCCGAAGGCATTCCTGGCGGCGGTAGTGGAAGACACGACGAAGAGCGTGATAAAGGCATTGAACATGAGCGATAGGCTGCTAGTGGAGCACGGAAGCAGCAACAACGAAGGGCTTAAGATGAGTCTGAATGACTGCAAGCAACTTCTGGAATCGGCCATGGACAGTCTGGAATTATCCACCCACTTGTTGGGGAATGGGTCGATCGAGGATGTGAACGAGCGAACCCCTGATTTCAGAAACTGGCTGGCGGCTGTCATATCCTACCAACAAGCTTGCATGGAAGGATTTGACGAGAACAACGAGGGGGAGAAGCAGGTGAGGACACAATTGCAACAAGAAGGGGTGAACGAGATGGTGAAATTCACAGGAGTAGCCCTGGACATAATGTCGGATCTGGCCCAAATTCTGGAGAGCTTTGGGCTGAAGCTAGACGTGAAGCCTGCTTCTCGTCGTCTTATGGAGGTGGACAGCGAAGGCTACCCTACCTGGTTCTCTGCTTCGGACAGGAAGCTATTGGGGAAGCTGAAGAAGAAGATTAAGAAAGCAAAGAGTCAACCCACCGTAGTTGTGGCTAAGGATGGGAGTGGGCAGTTCAGGACCATCACGGATGCTATTAACGCCTACCCCAAAAACGGTCTTGCACCTGGTGCCAGATACGTGATCTTGGTGAAGGCAGGAGTATACGCTGAGTACGTTACGGTTCCAAAAACAGCCGTGAATGTGCTTATGTATGGTGAGGGTGCAGGTAGGACCATTATCACTGGCCGCAAGAACTTTGCGGAAGGTGTCAAGACAATGAACACAGCTACCTTCGCCAATTTGGGAACTGGCTTCATCGCCAAAGGCATCACATTCGAGAACACTGCTGGTGCGGCAGGGCATCAAGCAGTGGCCTTTAGAAACCAAGGAGATATGTCTGCTTTCTTTGATTGCGCTTTCGTCGGTTATCAAGACACATTGTATGTCCAAACCAACCGTCAATTCTACAGGAACTGTGATATCTCCGGTACCATTGATTTCATCTTCGGAGTGTCTACCACATTGATACAGAATTCTAGAATCATCTTGAGGAGGCCAATGGACAACCAATTTAACACGGTCACAGCAGATGGGACAGCGGAAGACAGAATGCCCACTGGGATTGTCATCCAGAACTGTGACATCCTTCCAGAGCCAGCGCTGTTCCCTGCCAGGTTCCAACTGAAATCATACTTGGGAAGGCCATGGAAGCAATTCTCTAAAACTGTCGTAATGGAGTCAAGAATTGGTGACGTCATTCATCCCGATGGCTGGTTCCCTTGGCAGGGAAATATGTACCTAGACACATTGTTCTATGCTGAGCACAACAACGTAGGACCTGGTGCTAATGTAGACAGAAGAGTGAGGTGGCGTGGATACAGAGGCCTTCTTAATAAGCAGCAAGCTGCTGCCTTCACTGCTGCCGAGTTCCTCAAGGGAGGAGTGGGATCTAGAGCTGAGGATTGGTTGAGGGCTACTCAGATTCCTTTTGACCTTGGCTTCACCAAACCTTAA 1740 0.4977 MNGKVLVSAVSIILVVGVAIGAVVVVRNKSNESGISAHQNTVMTMCQNTQDQKLCHETLSSVKVNDTSDPKAFLAAVVEDTTKSVIKALNMSDRLLVEHGSSNNEGLKMSLNDCKQLLESAMDSLELSTHLLGNGSIEDVNERTPDFRNWLAAVISYQQACMEGFDENNEGEKQVRTQLQQEGVNEMVKFTGVALDIMSDLAQILESFGLKLDVKPASRRLMEVDSEGYPTWFSASDRKLLGKLKKKIKKAKSQPTVVVAKDGSGQFRTITDAINAYPKNGLAPGARYVILVKAGVYAEYVTVPKTAVNVLMYGEGAGRTIITGRKNFAEGVKTMNTATFANLGTGFIAKGITFENTAGAAGHQAVAFRNQGDMSAFFDCAFVGYQDTLYVQTNRQFYRNCDISGTIDFIFGVSTTLIQNSRIILRRPMDNQFNTVTADGTAEDRMPTGIVIQNCDILPEPALFPARFQLKSYLGRPWKQFSKTVVMESRIGDVIHPDGWFPWQGNMYLDTLFYAEHNNVGPGANVDRRVRWRGYRGLLNKQQAAAFTAAEFLKGGVGSRAEDWLRATQIPFDLGFTKP 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3742 579 Pfam Plant invertase/pectin methylesterase inhibitor 41 197 IPR006501 GO:0004857
Sto13g3742 579 SMART PMEI_2 37 197 IPR006501 GO:0004857
Sto13g3742 579 CDD PMEI-like_3 44 202 - -
Sto13g3742 579 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 202 IPR035513 -
Sto13g3742 579 Gene3D - 250 576 IPR012334 -
Sto13g3742 579 PANTHER PECTINESTERASE 3 576 - -
Sto13g3742 579 PANTHER PECTINESTERASE 3 576 - -
Sto13g3742 579 SUPERFAMILY Pectin lyase-like 253 557 IPR011050 -
Sto13g3742 579 Pfam Pectinesterase 257 555 IPR000070 GO:0030599|GO:0042545
Sto13g3742 579 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 200 IPR035513 -
Sto13g3742 579 TIGRFAM PME_inhib: pectinesterase inhibitor domain 25 195 IPR006501 GO:0004857
Sto13g3742 579 ProSitePatterns Pectinesterase signature 2. 403 412 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3742 Sto-Chr13 39251907 39258342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3742 1 576 Carbohydrate Esterase AT2G47030 36.885 2.78e-128 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3742 K01051 - gmx:100789650 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0362 8 2296853 2298612 Sto13g3742 13 39251907 39258342 CCT