Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3726 ATGGGCCTTTGCTTCAACTCAACACTACTAAATGCTTCTGTATCGCATACAGATTATAAGAATTGGATTTCTTGGAACCTCAGGAATTACAAGAGGGCTAGAGTTTTGAAGACACAATGGAATGTTGCAGCAGCTGGTGGTGATTGGAAGCTGGACAAGGCTGAGACTAACAAACTTAAAATAAGTGTTGCCCAAGACGGTACCGCTGACTTCAACACCATTACACAAGCTCTTGATACCATTCCACCACGCAATACTAGAAGAGTTGTAGTGTCCATTGGGCCTGGTGtttatagGGAGAAGATAGTGATACCCAGAAACAAGGCGTTTATAACATTGGAAGGGGACGCTAGGGATCCCCCAACTATTACTGGCAATGATACAGCCTCCGTTACTGGAAGGGACGGCACACCCTTGGGCACATTCCAGAGTGCCACGGTTGCTGTGGACGCTAATTATTTTATTGCCCTTAACATCAAATTTGAGAACAGAGCAGCGCATGAGGTAGGAAAGGTGGGAGGGCAAGGGGTAGCGCTACGAATATCAGGGACCAAAGCTGCATTTTACAATTGCAGCTTCTACGGAGATCAAGACACACTCTATGATCACAAAGGTCTTCATTACTTTAACAATTGCTTCATTCAAGGCTCTGTGGATTTCATCTTCGGCTCCGGCAGATCCCTTTACGAGAACTGCTATCTAAATTCAATATCGAAGAAGGTGGCGTCCATCACAGCACAGAAGCGTACAAATGCATCGTTAGAGAGTGGATTTTCGTTCAAGAACAGCGTGATCACAGGAAGTGGGCAAGTATATCTGGGAAGAGCGTGGGGGGATTACTCCAGAGTGGTTTTCTCTTACACCTACATGGACAAGATTGTTGTCCCCCAAGGCTGGAGCGATTGGGGTGACCAAAAGCGCGACTTCAGAGTCTACTATGCAGAATACAAGTGTAGTGGTCCTGGGGCTAACTTCACCGCAAGAGTCCCATGGGCTCACATCCTTTCCGACCAAGAGGCTCTACCTTTTATCGGAACTCATTACATTGAAGGCGACACTTGGCTCCTTCCCCTTCcctattga 1083 0.4626 MGLCFNSTLLNASVSHTDYKNWISWNLRNYKRARVLKTQWNVAAAGGDWKLDKAETNKLKISVAQDGTADFNTITQALDTIPPRNTRRVVVSIGPGVYREKIVIPRNKAFITLEGDARDPPTITGNDTASVTGRDGTPLGTFQSATVAVDANYFIALNIKFENRAAHEVGKVGGQGVALRISGTKAAFYNCSFYGDQDTLYDHKGLHYFNNCFIQGSVDFIFGSGRSLYENCYLNSISKKVASITAQKRTNASLESGFSFKNSVITGSGQVYLGRAWGDYSRVVFSYTYMDKIVVPQGWSDWGDQKRDFRVYYAEYKCSGPGANFTARVPWAHILSDQEALPFIGTHYIEGDTWLLPLPY 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3726 360 ProSitePatterns Pectinesterase signature 2. 214 223 IPR033131 -
Sto13g3726 360 SUPERFAMILY Pectin lyase-like 60 357 IPR011050 -
Sto13g3726 360 Pfam Pectinesterase 61 352 IPR000070 GO:0030599|GO:0042545
Sto13g3726 360 PANTHER PECTINESTERASE 11 356 - -
Sto13g3726 360 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 11 356 - -
Sto13g3726 360 Gene3D - 55 358 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3726 Sto-Chr13 39132610 39134329 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3726 61 357 Carbohydrate Esterase AT5G47500 45.485 1.27e-90 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3726 K01051 - qsu:112011696 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3726 13 39132610 39134329 Sto13g3726 13 39132610 39134329 ECH