Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3707 TTGCTTTTATTATCTTGCTTGGTGATTATGGCCGATTCTAATGCATTTGATAAAACACTGGAACCCCAGTTATCTCCAGCAAGACCACCTTCGCCAGCCACAGTTGTTCATGATCTGCCCCTACCCGCAAATCTCAATGGGCAGAAGCATTTTACTGGCCACGCCCCTGCAAGTTCACATTTATCCAAACCATTCATGAAGAGGAGTGAATTAGGACCTCAAATTCCTGGCTTCAAAGATATTTCCCCTATGCATTCTACCGCTGGTTCAATTCCTTCTGGTTTAGCTCAGCCACCATTGTCCCCTTATGTTTCAAATTGTTGTAAACAAGACATGGTGTTGAAGCGAGGAAGTAACAGTTGCCACTGTGTGTATCCCATAAAATTAGACCTTCTTCTTTTGAATGTCTCTCAAAGCTCTAACTGGAATCTTTTTCTCGATGAGTTAGCTGCCCAACTTGGATTGCAAACTACCCAGATTGAACTGATAAATTTCTATGTACTCAGCTTATCAACATTAAATATATCAATGGATATAACTCCACATAAAGGGATCAGTTTCTCTGCCTCTGAAGCATCAAAAATAAACTCTTCGCTTTCAATGCATAAGATTCAACTGGACCCTAAATTAGTGGGTGACTACAAACTTCTCAATATGACGTGGTATGAGCCTCCACCACCGTCTCAAGCTCCTACTTTTGCGGCATCACCATTGAAAGCTCCTATTTATCATACACCAGCAACTACGTCAGTAGGTGCTTCAAATAGGAGAAGGCATTCAAATTTGTATCCTATTCTTGGGATTGGTGCTGGCATACTTTTCATTGCCATTATATCGGTTCTTGTACTTTGCTTTTGCACATTGAGGCCTAAGACCAAAAGATCTCCAATAGATACTGAAAAGCCAAGGGCAGAAGCTGCAGTTCCAACTGTGGGATCTTTTCCCCACCCAACCAGTACACGATTTATTGCATATGAAGAACTTAAAGAAGCAACAAACAACTTTGAAGCTGCAAGCATACTTGGAGAAGGCGGGTTTGGTAGAGTTTTTAAAGGTGTGTTGAATGATGGTACTGCTGTTGCTATTAAGAGGCTTACTAATGGAGGGCAACAAGGGGACAAAGAGTTTTTGGTTGAGGTTGAGATGCTTAGTCGGTTGCATCATCGTAATCTTGTAAAATTAGTGGGATACTATAGTAATCGTGATTCGTCACAAAATCTTCTATGTTATGAGCTTGTCCCAAATGGAAGTTTAGAGGCCTGGCTTCATGGTCCCTTGGGAATAAATTGTCCTTTGGACTGGGACACCAGGATGAAGATTGCCCTTGATGCTGCTAGAGGACTTGCATACCTGCATGAAGACTCACAGCCCTGCGTTATACACAGAGATTTCAAAGCGTCCAACATATTGCTTGAAAACAACTTTCATGCTAAAGTTGCAGATTTTGGTCTTGCTAAACAGGCACCTGAAGGCAGAGCTAATTACCTGTCTACTCGCGTCATGGGAACGTTTGGGTATGTAGCTCCTGAATATGCCATGACCGGACACCTACTTGTTAAAAGTGATGTTTATAGCTATGGGGTTGTCTTGCTAGAATTGCTGACTGGAAGGAAACCTGTGGATATGTCACAGCCAGCTGGACAAGAAAACCTGGTTACTTGGGCAAGGCCAATTCTTAGAGATAAGGACCGGTTGGAAGAGCTTGGTGATCCAAGGCTGGGGGGAAAGTACCCAAAGGAAGATTTCGTCCGTGTTTGTACTATTGCCGCAGCCTGTGTTGCTCCTGAAGCAAGCCAACGACCCACCATGGGTGAAGTGGTACAATCACTTAAAATGGTGCAGCGCATGACAGAACATCAGTATTCCATGTTGGCCTCCTCCAATACACGGACTAACCTAAGACAGTCCTCCACCACTTTCGAGTCTGATGGGACATCTTCTATGTTCTCTTCGGGTCCCTACTCTGGGCTTAGCGTCTTTGACAATGACAACGTCTCTAGGACAGCAGTTTTCTCTGAAGATCTTCATGAAGGACGATGA 2040 0.4348 LLLLSCLVIMADSNAFDKTLEPQLSPARPPSPATVVHDLPLPANLNGQKHFTGHAPASSHLSKPFMKRSELGPQIPGFKDISPMHSTAGSIPSGLAQPPLSPYVSNCCKQDMVLKRGSNSCHCVYPIKLDLLLLNVSQSSNWNLFLDELAAQLGLQTTQIELINFYVLSLSTLNISMDITPHKGISFSASEASKINSSLSMHKIQLDPKLVGDYKLLNMTWYEPPPPSQAPTFAASPLKAPIYHTPATTSVGASNRRRHSNLYPILGIGAGILFIAIISVLVLCFCTLRPKTKRSPIDTEKPRAEAAVPTVGSFPHPTSTRFIAYEELKEATNNFEAASILGEGGFGRVFKGVLNDGTAVAIKRLTNGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPAGQENLVTWARPILRDKDRLEELGDPRLGGKYPKEDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRMTEHQYSMLASSNTRTNLRQSSTTFESDGTSSMFSSGPYSGLSVFDNDNVSRTAVFSEDLHEGR 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3707 679 Gene3D Transferase(Phosphotransferase) domain 1 413 637 - -
Sto13g3707 679 Pfam Protein kinase domain 336 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3707 679 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 33 679 - -
Sto13g3707 679 PANTHER OS01G0750732 PROTEIN 33 679 - -
Sto13g3707 679 ProSiteProfiles Protein kinase domain profile. 335 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3707 679 MobiDBLite consensus disorder prediction 625 647 - -
Sto13g3707 679 SUPERFAMILY Protein kinase-like (PK-like) 311 612 IPR011009 -
Sto13g3707 679 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Sto13g3707 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Sto13g3707 679 Gene3D Phosphorylase Kinase; domain 1 317 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3707 Sto-Chr13 39012854 39016776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3707 1 679 Receptor kinase-like Gene Family AT4G02010 69.844 0.0 979
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Sto13g3707 Pkinase 1.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3707 - - gmx:100793528 1098.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3707 13 39012854 39016776 Sto13g3707 13 39012854 39016776 ECH