Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3703 ATGGATATGGATGCTGCTGCTGctactgctactactactacctccGACCCAGAAGCATCTTCCCAGCTCAACAGACCTGAAATCCAAGAATCCAAAAAAAGGAAAATGGTTCAGAAAACAGTTGTGAGGGTGAGAATAGGAGAGAATGTAAGCAAACTGAAGAACGAAGGGCTACCTTCAGATTTCTGGTCTTGGAGGAAATATGGACAGAAGCCAATTAAAGGATCTCCTTATCCAAGGGGCTATTATCGATGCAGCACATCAAAGGGATGTTCAGCAAAAAAGCAAGTAGAGAGATGCAGAACAGATGCTTCAATGCTGATTGTGACATATACCTCAACTCATAACCATCCAGCTCCTGATTTACCATCCACAACTCAAACGAAACAAGATCTTCCACCTCCTGCTTTGAAGGAGGAACTGGAAGAGCAAGAAGGAGAGAAGAAAGATGAAataggtggtgggaaggaagaaaattttcattatttgCAATCGGCAATAGGGTGTTGTGAAGACATTATTATGGAGCAAGAGGAAGATCCCTTCAAGTTGAACCCAGAGAAAAGCCATGAGAGAATAGATCTTCTgttggaggaggaagaggaagagccGCTCTGTTATTCTCAGCTCAACAACTTCTCAACGCTGAAATCGGAGGAACTTGATTATTTCGACGAGCTTGAAGAACTACCCATGTCTTCCTCTTTGTTGAAGTTGATGAGCAGCAATTTTTCCGATGAAAGGATTCCTATTGCTCCTTCTTGA 765 0.3791 MDMDAAAATATTTTSDPEASSQLNRPEIQESKKRKMVQKTVVRVRIGENVSKLKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASMLIVTYTSTHNHPAPDLPSTTQTKQDLPPPALKEELEEQEGEKKDEIGGGKEENFHYLQSAIGCCEDIIMEQEEDPFKLNPEKSHERIDLLLEEEEEEPLCYSQLNNFSTLKSEELDYFDELEELPMSSSLLKLMSSNFSDERIPIAPS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3703 254 MobiDBLite consensus disorder prediction 7 26 - -
Sto13g3703 254 SUPERFAMILY WRKY DNA-binding domain 56 120 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto13g3703 254 MobiDBLite consensus disorder prediction 1 37 - -
Sto13g3703 254 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 21 236 IPR044810 GO:0003700
Sto13g3703 254 Pfam WRKY DNA -binding domain 61 118 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g3703 254 Gene3D WRKY domain 44 121 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto13g3703 254 MobiDBLite consensus disorder prediction 114 133 - -
Sto13g3703 254 SMART WRKY_cls 59 119 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g3703 254 MobiDBLite consensus disorder prediction 138 157 - -
Sto13g3703 254 MobiDBLite consensus disorder prediction 114 132 - -
Sto13g3703 254 ProSiteProfiles WRKY domain profile. 54 120 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto13g3703 254 PANTHER WRKY TRANSCRIPTION FACTOR 69-RELATED 21 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3703 Sto-Chr13 38993773 38994843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3703 7 120 WRKY Transcription Factor Family AT4G01250 56.140 3.68e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto13g3703 WRKY 1.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3703 - - gmx:100127423 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3703 13 38993773 38994843 Sto13g3703 13 38993773 38994843 ECH