Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3702 ATGAATAACATTAATGCGTCTCCAAGAGAGATATTCTACCTCCTCACACTCACACTGCTTAGCCTCATCCTCCCTCTCTCGTTTCTTCTCTTAGCCAGGCTGTCTGGTGCCCAATACTATGTTGAAAGCCTCACACGCTATAATTCACCACCACACTACCCTTTCCCCTATCTCATATCCCTCGCCCTCCGTATCAACCCACCTATTCTCTACCTGCTGGTGTCTTGCGTCAGCGTGGCCGCTCTAATCCACGGCTTGACCGGAAAGATCACCCTTTTCGCCGATTACTCATACTCCCAAAACCAACCTCGTCTATACACAGCGTGGATTGTGCTTTGTACTTTCCAAGTGTGcgtgggtttggggattgaagGGAGCATAGCTGCGGGGCTTTATGATGAGTGGGATTCGAGCTTCGGAGTTGAAAGGAGTTTGTTGAGCAGAGTGATATTTCTGATGGGATTGCACGAAACGACGCAGCTTTGGTGCAGAGCAGTGGTGAAGCCGGTGGTGGACGATACGGTGTTCGGGGTTGGTAGAAGCGAGAGATGGATTGAGAGGGTGGCCATGGCGGGGAGCTTGGGTGGGTTGTGGTGGTGGAAGCTGAGGGAGGAGGTTGAGACTTTGGTGGTTATGGCGGAAGCAAAGAAAGAGCAATTCATGGATGTGGGAATGGCGGATTTCGTTGGATGGTGGTTGTATTATCTCACCGTTACAATTGGGATGGTCAGGCTTGTTAAGGCTCTAATGTGGCTTCCCACGTTTTCTCTGTGCAGAAGAAGCCCATCCGAGATCAATTCCCCGCTTCAGCTTCACCCCTGCCAGAATGATGACAAGGTTAATACAGTTTCTTCAATCATTTACACCTTCATTCATTTGTATTCAACCATGATTGATGATAACACACATAATCCCGTCGGCGCTCATGAAAATAAGCACATTGTCCCGAGAGTTCATTGCCAAAACCTTTCCTACTTTCTGCTACAATCTGACATGGCCAGCGACCTTTTATCCTCCACACCTTTCAATTTCAACGGAATCCAGGGCGGTTACGATCCTATACAAGAGGACGTTGTGTCCCAAGGGAAACACAATTTCTCATCTGACATGGAATTTCTCGAAGATATGACTCCGAATCGTTTTATTAAAGATCAAAATCAGCTGGAACCCAAATTTGATAACTTGATGTTTCAAGACTTCACCTTTGAACCTGTTCTGCAACCAACACAAGCATTTCCGGAAACTACAAGGCTTAAGAATCATATGGTGGCAACTTCAGAATTCGTCcgaaacaataataataacaagcCATCGCAACCATCTTCAATTTTAGCATCTTTGGAGCTGTTGAACAATTACGGAAGTAGACTGAAGAGGCTAACGGGGCAAAACATAAGCAAGCCAAAGCCAATGCCAATCAGTAGTGAAAGTCGTCACAAGTTGTCAACTGAGGAAATCATAAGAGTTGCGGGAGAAAGGTATGTCCAATTCTCTACTCACTGGCACGATAATATATGCATTCCTATGCATCCATATGGGTTTGGTCTAGGACTAGGTGGTCTGTCCGAGGAAGAAAACAGAGACGTCGAACTTGTTCAGTTTCTTCTGACGGCGGCTGAGAGAGTTGGATGCGAACAATTCGAACGTGCCGGCCGATTAGTCCTACACTGTCAATTGAATTCGTCGGCTCGTACAAGCCCGGTTCAGAAAGTTATCTCCTATTTCGCTCAAGCACTCGGAGAGAGAATCGCCAAAGAAACGGGAATAACAACGGCACTGAATGGATCTGAGAAAAACGAAGAACAGGAATTAGTTCAGAAGATGGATTTTAATTCATTATTCATGTGTCATAACAACCTTCCTTTTCATCAAGTGATGCAATTAACTAGTATTCAAGCAATAGTGGAGCACGTTGCTTCAGAAACCAAGATCCACGTGATTGATCTTGAAATCAAAAGCGGGGTGCAATGGACGGCTCTGATGCAAGCACTGGCGGAGCGTCATGAACGGCCTGTACAGCTTCTCAAGATAACTGGCATTGGATATAGAGGCAAAACCAAGTTAGAGACAGGTCAATATTTAGCCAAATTTGCGGAATCCTTGAACTTGCCGTTTTCCTATAACGCAGTTTTTGTTACAGACATGATGGAAATTAGGGAAAGTCACTTCCATATTTCCGATGATGAAGCTTTAGTAGTGTCCTCCCCTTATGTTCTTAGGAAGATGGTATCAAGGcctgagtgtttggaaaacttgatgagaataataaaaaatatgaaaccaTCTATAATGTTAGTGCTTGAAGTGGAAGCCAACCATAACTCACCTTCCTTTGTGAATCGCTTCGTTGAAGCCTTGTTCTTCTACTCGGCATTTTTGGACTGCATCGAAACGTGCATGAAGGAGGAGAATGCGTGCAAAGTGACTCTTGAAGCGATTTTAGGTGAAAGCATAAGAAACATTGTTGCTATGGAAGGCAAAGACAGAAGAGTGAGGAGTGTGAAGATTGATGTTTGGAGAAGGTTCTTTGCAAGATACAGAGCGGTGGAGACAGGTTTTAGTGAATCATCTCTGTACCAAGCTAACTTAGTCATTAAGGAATTTCCTCATGGCAAATTTTGCACTCTTGATAACAATGGCAAGACTCTTACTGTTGGGTGGAAGGGGACCCAAATACATTCTCTTTCAGCTTGGAAGTTCCTCTGA 2706 0.435 MNNINASPREIFYLLTLTLLSLILPLSFLLLARLSGAQYYVESLTRYNSPPHYPFPYLISLALRINPPILYLLVSCVSVAALIHGLTGKITLFADYSYSQNQPRLYTAWIVLCTFQVCVGLGIEGSIAAGLYDEWDSSFGVERSLLSRVIFLMGLHETTQLWCRAVVKPVVDDTVFGVGRSERWIERVAMAGSLGGLWWWKLREEVETLVVMAEAKKEQFMDVGMADFVGWWLYYLTVTIGMVRLVKALMWLPTFSLCRRSPSEINSPLQLHPCQNDDKVNTVSSIIYTFIHLYSTMIDDNTHNPVGAHENKHIVPRVHCQNLSYFLLQSDMASDLLSSTPFNFNGIQGGYDPIQEDVVSQGKHNFSSDMEFLEDMTPNRFIKDQNQLEPKFDNLMFQDFTFEPVLQPTQAFPETTRLKNHMVATSEFVRNNNNNKPSQPSSILASLELLNNYGSRLKRLTGQNISKPKPMPISSESRHKLSTEEIIRVAGERYVQFSTHWHDNICIPMHPYGFGLGLGGLSEEENRDVELVQFLLTAAERVGCEQFERAGRLVLHCQLNSSARTSPVQKVISYFAQALGERIAKETGITTALNGSEKNEEQELVQKMDFNSLFMCHNNLPFHQVMQLTSIQAIVEHVASETKIHVIDLEIKSGVQWTALMQALAERHERPVQLLKITGIGYRGKTKLETGQYLAKFAESLNLPFSYNAVFVTDMMEIRESHFHISDDEALVVSSPYVLRKMVSRPECLENLMRIIKNMKPSIMLVLEVEANHNSPSFVNRFVEALFFYSAFLDCIETCMKEENACKVTLEAILGESIRNIVAMEGKDRRVRSVKIDVWRRFFARYRAVETGFSESSLYQANLVIKEFPHGKFCTLDNNGKTLTVGWKGTQIHSLSAWKFL 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3702 901 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 385 899 IPR005202 -
Sto13g3702 901 Pfam GRAS domain family 531 899 IPR005202 -
Sto13g3702 901 ProSiteProfiles GRAS family profile. 522 899 IPR005202 -
Sto13g3702 901 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 385 899 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3702 Sto-Chr13 38985173 38989526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3702 521 900 GRAS Transcription Factor Family AT3G03450 31.980 7.45e-50 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto13g3702 GRAS 9.4e-83 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3702 - - gmx:100791952 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0414 8 2580863 2581741 Sto13g3702 13 38985173 38989526 CCT
Sto13g3702 13 38985173 38989526 Sto13g3702 13 38985173 38989526 ECH