Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3701 ATGGGCAGTGACCTTTTATCTTCCAACGGTATCCTGGGCGGTTATGATTCTATACAAGAGGATGGTGTGTACCATCATGGCAGAGAATTTCTGGAAAATATCACTTCTCTCCCAACTGAGAATTCATTGATTGAAGATCATAATCAACAACAAGAACCTGATTTTGATTTCTTCAAGTTGCAAGAATTCCCCTTTGACTCTGATATGCAACCGACACGACCATTTCCGGAAACTAGAAGGCTCAAAAGTAAGGAAGTGGCAAATTCAGAATTGGCCCAATACGATAATAAGCCATCGCCAACATcttcaattttaaaatcattGGAGCTCTTGAGCAATTACGGTAATAGACTCAAGAGGCTAATGGAGCAAAATATAAGCAAGCCAATTCCAATCAGTTCAGAGGGTCGTCACAAGTTGTCAACTCAGGAAATAATAAGACTCGCGGGAGAAAGGTATGTCCAATTCTCTACCCACTGGGACGATACTATGTGCATTCCTATGCATCCATATGGGTTTGATCTAGGACTAGGTGGTCTGTCCGAGGAAGAAAACAGAGACGTTGAATTCGTTCAATTTCTTTTGACAGCAGCTGAGAAGGTAGGATGCGAACAATTCGAACGTGCCAGCAAATTAGTTTTACACTGTCAATTGAATTCGTCGGCTTGTGCAAGCCCAGTTCAGAAAGTTATCTCCTCTTTCGCACAAGCACTTGGAGAGAGAATAGCCAAAGAAACAGGAATAATAACGACACTGAAAGAATCTGAGAAAAACAAAGAACAGGAATTAATAAAGAAGATGGATTTTAATGTAGCCTTGATGTATCATAAGAAGATTCCTTTCCATCAAATGATGCAATTTACTGGCATACAAGCTATAGTGGAAAACGTTGTATCAGAGACCAAAATCCATGTGATTGATCTTGCAATCGCATGTGGAATGCAATGGACGGCTTTGATGCAAACACTAGCGGAGCGTCGTGAAAGGCCAATACAGCTTCTCAAGATAACTGCCATTGGATTTAGAGGGAAAGACAAGTTAGAAGAGACAGGTGAGAATTTAGTGTGTTTTGCGGAGTCCTTGAACTTGCCCTTTTGGTACAAGGCAGTTTTTGTGACAGACATGATGGAAATGAAGGAAGATCGGTTTGAAATTGACGATGATGAAGTTGTAGCTGTGTACGCTCCCTATGTCCTTAGGACGATGGTATCAAGGCCTGAGTGCTTGGAAAACTTGATGAGGATATTAAGAAACATTAAGCCATGTATAATGATAGTGCTTGAAGTGGAAGCAAAGCACAACTCATCCTCCTTTGTGAACCGCTTCGTTGAAGCTTTGTTCTACTTCTCGGCATTTATGGATTGCATTGAAACGTGCATAGAGGAGAATGAGTGCAAAGTGACTTTTGAAGCGATTTTAGGTGAAAGTTTAAGAAACATTGTTGCTATGGAAGGCAAAGAAAGAACAGTGAGGCATGTGAAGATTGATGTTTGGAGAAGGTTCTTTGCAAGTCTTGATAAAAATGGCAGGAGTCTTACAGTTGGATGGAAGGGAACCCCAATAAATTCTCTTTCTGCTTGGAAGTTCCTCTGA 1593 0.4062 MGSDLLSSNGILGGYDSIQEDGVYHHGREFLENITSLPTENSLIEDHNQQQEPDFDFFKLQEFPFDSDMQPTRPFPETRRLKSKEVANSELAQYDNKPSPTSSILKSLELLSNYGNRLKRLMEQNISKPIPISSEGRHKLSTQEIIRLAGERYVQFSTHWDDTMCIPMHPYGFDLGLGGLSEEENRDVEFVQFLLTAAEKVGCEQFERASKLVLHCQLNSSACASPVQKVISSFAQALGERIAKETGIITTLKESEKNKEQELIKKMDFNVALMYHKKIPFHQMMQFTGIQAIVENVVSETKIHVIDLAIACGMQWTALMQTLAERRERPIQLLKITAIGFRGKDKLEETGENLVCFAESLNLPFWYKAVFVTDMMEMKEDRFEIDDDEVVAVYAPYVLRTMVSRPECLENLMRILRNIKPCIMIVLEVEAKHNSSSFVNRFVEALFYFSAFMDCIETCIEENECKVTFEAILGESLRNIVAMEGKERTVRHVKIDVWRRFFASLDKNGRSLTVGWKGTPINSLSAWKFL 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3701 530 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 44 503 IPR005202 -
Sto13g3701 530 Pfam GRAS domain family 191 503 IPR005202 -
Sto13g3701 530 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 44 503 - -
Sto13g3701 530 ProSiteProfiles GRAS family profile. 181 530 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3701 Sto-Chr13 38981623 38983305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3701 188 529 GRAS Transcription Factor Family AT1G66350 27.882 2.17e-45 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto13g3701 GRAS 2.1e-69 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3701 - - gmx:100791952 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3701 13 38981623 38983305 Sto13g3701 13 38981623 38983305 ECH