Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3700 ATGGTCTCCACAGCAACTGACTCTGCGCCCAAACTTAAAAAACCACATGGAGAGCACGATGCTGTTGGAACCTTGTCAATCAAGATTAATCAGCTTAAAAAGCAAATCCAGGCGGAGAGAGTTGTATCAATTAAAGAAAAACTTCAGAGGAATGGAGAGAAGCTACAATGTCATGTTGCAGAGATGGTCTCAACAATATCAAGAAGGAATTCTTCACACAAGGAGGGAATTAGGATTAGTCATATGCTTGCTACAAGAATTGACCACCCAATATGTAAGTTCAGTGGTTTCTCGCAAGTTTCAGGAGACAAAGACCACACAAACAATCAAGAAGTGCTATCTGCAACAAGTGTCAAGATTCCATACATTGAAAAATTACCACCATATACATCATGGATATTTTTGGAGAGAAATCAGAGAATGGCTGAAGATCAGTCTGTGGTTGGGAGAAGGCGTATCTACTATGATGACCAAAATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAAGAACTAACAGAAACTGAGGAAGATAAGCATGAATTTTCTGAGGGAGAAGATCGAATTTTATGGATGGCAATTGAGGAACATGGATTAACTGAGGAAGTATTGGAACTTGTGAGTCAATTCGTTGGAGGTACTATACTAGAAATCCAGGATAGGTACAAAAATCtcaaggaaaagaaaatggggAGGCGGGACCAGCATTCTGAAGGTTGTGGAGATTATGAATCTCGTATTGGCATATGTTTGGAGAAAAGCCTGAGTACTGTGTTAGATTCTTTTGATAACCTGTTTTGTCGCCGGTGCATGCAGATGTTTGATTGTCGTTTGCATGGCTGTTCTCAACCCCTAATATATCCTAGTGAAAAGCAGCCAGTTTGGTTTGACCATGAAGAAGACAGGAAACCATGCAGTGATCAATGTTACCTTCAGTTAAAGGCTGTGAAAAATTCATCAGACCCTAGGTGTTTGCAGAGTAATAAACCCACAACTATAGAAGAGGAAGAACTGACACTAGCACCCTCTGGTGCGGAAGAGCCTGGAAACCAGAAAACCCCACCGTTTCGAACAGAGGTTGCTAGTAGTGGAGGTCTCAACTTAAATGTGCCTGTTGCAGAAAACCTGGGGAAACGCAAGATCACTAATCAATCAGATACAGCAACATGTGACTTAACAGTGCCTCCTGATGATTCACAGAGTTCTtgtaaaaagcaaaagaaaatttCAGATACTGATGTAGTTACTTTAATTAGTGATTATAACAGGGACGTAAATGTTGGTGTGTGTGATGAAAACAAATGCATTATTGCTTCTGCATCTTTAAATGATTCTGTAGAGCATACTTCTAATAaatttagattttctgggaGCACTTGTCATGGTGAACATGAAAATGTTGGTCATGGACCAAAAGGTGCCACAAAAGAGACAGAAATCAAGCAGTCATCCAATTCGGTGGTAGAGCATGTTGAAGGGATGCAAAGTGTCTCAGAATGGAAACCTCTGGAGAAAGAACTTTACTTGAAGGGTGTAGAAATGTTTGGGAAAAACAGTTGCCTCATAACAAGGAACTTACTTTCTGGCTTGAAGACTTGCATGGAAGTAGCTAGTTATATGCATGTTGGTGAAGGATCAATGCCCCGCGGACATAATGTTGCATCAAGTTCGCTCAGGGATGACAATGGAAAAACTGATGCAGAGTACATAGACCAAGAGATGCCAGCAAGAGCACGATTGCTGCGGAAAAGGGGCAAGACAAGGAAGTTTAAATATTCCTGGAAGTCTGCTGGCCACCCATCAATATGGAAAAGAATTGCGGATGGGAAAAACCAATCTTGTAAGCAGTATACACCCTGTGGATGTCAGTCAATGTGTGGAAAACAGTGTCCATGCCTTCATAATGGAACTTGCTGTGAGAAATATTGTGGGTGTTCAAAAAGCTGCAAAAACAGATTCAGGGGATGCCACTGTGCTAAGAGTCAATGCAGAAGTCGGCAATGCCCATGCTTTGCTGCTGGACGTGAATGTGACCCTGATGTTTGTCGAAATTGCTGGGTTAGTTGCGGCGATGGTTCATTAGGAGAGCCACCTAGACGGGGAGAAGGTCAATGTGGAAATATGAGGCTCCTTTTAAGGCAACAACAGAGGATTCTTTTGGCCAAGTCTGATGTCGCAGGATGGGGAGCCTTCTTAAAGAACCCAGTTAACAAAAATGATTACCTAGGAGAATACACTGGGGAACTCATCTCCCACCGAGAAGCAGATAAGCGTGGAAAAATATATGATCGTGCAAACTCTTCATTCCTTTTTGACTTGAATGATCAGTACGTTCTGGATGCTTATCGCAAAGGAGACAAGCTAAAATTTGCTAATCACTCATCAAATCCAAACTGTTATGCAAAGGTGATGCTGGTTGCAGGCGACCATCGAGTAGGAATCTTTGCCAAGGAACACATTGAAGCTAGTGAGGAGCTGTTCTATGATTATCGTTATGGTCCAGATCAAGCACCCATTTGGGCTCGTAAACCTGGGTCTTCCAAGAGAGATGAATCAGCAGTTTCTCAAGGCAGAGCCAAGAAACACCAGTCTCATTGA 2601 0.4141 MVSTATDSAPKLKKPHGEHDAVGTLSIKINQLKKQIQAERVVSIKEKLQRNGEKLQCHVAEMVSTISRRNSSHKEGIRISHMLATRIDHPICKFSGFSQVSGDKDHTNNQEVLSATSVKIPYIEKLPPYTSWIFLERNQRMAEDQSVVGRRRIYYDDQNGSEALICSDSEEELTETEEDKHEFSEGEDRILWMAIEEHGLTEEVLELVSQFVGGTILEIQDRYKNLKEKKMGRRDQHSEGCGDYESRIGICLEKSLSTVLDSFDNLFCRRCMQMFDCRLHGCSQPLIYPSEKQPVWFDHEEDRKPCSDQCYLQLKAVKNSSDPRCLQSNKPTTIEEEELTLAPSGAEEPGNQKTPPFRTEVASSGGLNLNVPVAENLGKRKITNQSDTATCDLTVPPDDSQSSCKKQKKISDTDVVTLISDYNRDVNVGVCDENKCIIASASLNDSVEHTSNKFRFSGSTCHGEHENVGHGPKGATKETEIKQSSNSVVEHVEGMQSVSEWKPLEKELYLKGVEMFGKNSCLITRNLLSGLKTCMEVASYMHVGEGSMPRGHNVASSSLRDDNGKTDAEYIDQEMPARARLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKQCPCLHNGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPDQAPIWARKPGSSKRDESAVSQGRAKKHQSH 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3700 866 SMART sant 497 547 IPR001005 -
Sto13g3700 866 SMART sant 179 229 IPR001005 -
Sto13g3700 866 MobiDBLite consensus disorder prediction 845 859 - -
Sto13g3700 866 SMART CXC_2 652 689 IPR033467 -
Sto13g3700 866 ProSiteProfiles SET domain profile. 717 832 IPR001214 GO:0005515
Sto13g3700 866 SUPERFAMILY SET domain 588 837 IPR046341 -
Sto13g3700 866 MobiDBLite consensus disorder prediction 338 364 - -
Sto13g3700 866 Gene3D SET domain 618 834 IPR046341 -
Sto13g3700 866 CDD SET_EZH 717 833 - -
Sto13g3700 866 MobiDBLite consensus disorder prediction 458 480 - -
Sto13g3700 866 ProSiteProfiles CXC domain profile. 604 703 IPR026489 -
Sto13g3700 866 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 18 864 - -
Sto13g3700 866 Pfam CXC domain 656 687 IPR041355 -
Sto13g3700 866 Pfam SET domain 728 831 IPR001214 GO:0005515
Sto13g3700 866 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 866 IPR025778 GO:0031519
Sto13g3700 866 MobiDBLite consensus disorder prediction 839 866 - -
Sto13g3700 866 SMART set_7 717 838 IPR001214 GO:0005515
Sto13g3700 866 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 18 864 IPR045318 GO:0006338|GO:0018024
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3700 Sto-Chr13 38972120 38978607 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3700 706 835 C2H2 Transcription Factor Family AT2G23740 26.531 4.41e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sto13g3700 SET 2.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3700 - K11430 gmx:100808730 1307.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3700 13 38972120 38978607 Sto13g3700 13 38972120 38978607 ECH