Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3693 ATGGCCTCGATTCAACGCACTTCGAGTTCGGGATCCGAAGGGGGAGACCCACGAGATGTTGTGATCGatgagaggaagaggaagaggatgcTGTCGAATCGTGAATCGGCGAGGCGATCCCGAATGAAGAAGCAGAAACTAGTGGAAGATCTAACCAACGAAATCAGTCGATTGCAATGTGAAAACAGCCAGCTACATCAGAGCATAAAGGCCAAGGAGGAAGCATACACTGAGATCGAATCTGTTAACAATATCTTGAGGGCTCAGACGATGGAGTTGACGGATCAACTACGCTTTCTTAATTCGATCCTTGAGGTCGCTGAAGAGGCCATTGGGCTTTCTGTTGAAATCCCTGAGATACCAGATACCCTCCTCAACCCATGGCAGCTTCCTCTTCCAATGCAGGCGTCCTCAGACATGATAAAGACCGAgagattttctttttctggcCGGAATAAAGACAAGAGAGATAGGGCAGCACTTTATCTATCAGAGCATTGA 501 0.4391 MASIQRTSSSGSEGGDPRDVVIDERKRKRMLSNRESARRSRMKKQKLVEDLTNEISRLQCENSQLHQSIKAKEEAYTEIESVNNILRAQTMELTDQLRFLNSILEVAEEAIGLSVEIPEIPDTLLNPWQLPLPMQASSDMIKTERFSFSGRNKDKRDRAALYLSEH 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3693 166 SUPERFAMILY Leucine zipper domain 25 79 IPR046347 GO:0003700|GO:0006355
Sto13g3693 166 CDD bZIP_plant_GBF1 26 76 IPR045314 GO:0003700|GO:0006355
Sto13g3693 166 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 137 - -
Sto13g3693 166 Gene3D - 23 76 - -
Sto13g3693 166 Coils Coil 34 75 - -
Sto13g3693 166 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 23 86 IPR004827 GO:0003700|GO:0006355
Sto13g3693 166 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 137 - -
Sto13g3693 166 SMART brlzneu 21 85 IPR004827 GO:0003700|GO:0006355
Sto13g3693 166 Pfam bZIP transcription factor 25 81 IPR004827 GO:0003700|GO:0006355
Sto13g3693 166 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 28 43 IPR004827 GO:0003700|GO:0006355
Sto13g3693 166 MobiDBLite consensus disorder prediction 1 45 - -
Sto13g3693 166 MobiDBLite consensus disorder prediction 17 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3693 Sto-Chr13 38945414 38948486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3693 1 141 bZIP Transcription Factor Family AT3G62420 53.793 3.21e-47 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto13g3693 bZIP_1 1.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3693 K25786 - jre:108981706 192.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0416 8 2595134 2595574 Sto13g3693 13 38945414 38948486 CCT
Sto13g3693 13 38945414 38948486 Sto13g3693 13 38945414 38948486 ECH
Sto8g0416 8 2595134 2595574 Sto13g3693 13 38945414 38948486 ECH