Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3692 ATGAGTTCCTGCTTATCTATGCTCTTTAGGCCCTCATCTATAGTCATCTTGCTGGGATCTGCTGCACTTATAGTTGCCATCGTATTGACACCTTGCTGGTATTTTACTCTTAAACATATTGAGCACCATGTGAATTTGaactctcaagtctctctcttTAAATTGCAATCTGAAATTGAGGACTCAGCTAAACTGTTACAACCTTTGAATTCATCCTCCATCAACATAGCAAGATTACTAAGTTCAAACCTCAGTACTAATATCTCCTTCTCCGAGATCCAGACCAAGGTAGCTCCAGTAATGTTTCAAGCATTTGAGACAAATCCTCACTTAGCCGAAATCTCATTCAGTGGAATGGAAGGTCTCTTTTTTTCATACTACACTGATCATCATCGAGCCTATTTTGCAATGTACTCTAACTCTTCTTCCTCAAATGAAACCTTATACTACATTCAACGTGTAAATCGAGACACGGGGAAATTATATGGGGAAGCCATAACATCCAATGTTGGCCGTCCCTCAGTGAATACAAGTTGGATTGATGAACAAGTGAATAGTTCGTATGGATCATATGCCTCTGTGGGAACTATGAGGAGCAATGGTGGTAAACTCTTGTTCATTAGTTCAGTTAGAATCACAGGAGGAGGAGCAGGAGTTGTCTCTTTAGGGTTTCCAACAAAATTTATAGGTGATTTTATCAAACGTACTATTGGTGGTCAAGGCTCAAGTTTAATGTGTTTGGCTACTAAAGATGGGAAAGTGCTTGTACAAGGGATCCAACGCACCCGTATGGTCTTTTCAAATGATATGGTTACCTTCCGATCGCTGAACCCACAAACTTATTATGAGGTCACTGTTTCATGTAAGGATAAGGTTGTTGCTTCTATTTGGAAGACTATGGATACTCAGTATTTGCTCTACTGCTCCTCCATTGATATAATGGGAGTTCATTCGGTTTATGTATTGGCTATCCCGCAAAATGGATTAGTGCACTTTGTTGAGAAGAGTAGAAAAGAGGGATTGAAGCTACTTATTGtagtgatggtgatgatgattttCTCTTTCTTGAGTTCTGTAATTACATTGATCAAACAGATGAAGGCAACTCAAGAGGCAGACAGGAGGATGAACAAGAGCCTTGCCTTGGCTAGTGCCAGCCACGAAATTCGCAATTCTCTTGCAAACCTCACTGGTTTGATACACATGTCCTACGATGAAGTTGTCCCTGCTTCAGAATTGGACACCCATTTAAAACAAATGGATTTTTGCACCAAAGACTTACTAGGACTATTGAATTCTATACTTGATTTAAGCAAAATTGAGGCGGGAAAAATGCAACTTGAGGAAGAGGAGTTTGATCTGTCCCAACTTATAGAAGATGTAGTTGATTTATACCATCCTTTGGCCATGGAGAAAGGTGTAGATCTTATTTTGGACCCTTGTGATGTTTCTGTTGTTAGATATTCGAGTGTGAAAGGTGACCGAGGAAAGCTTAAGCAagttttgttaaatttattgAGCAACGCTGTTAAATTTACTGATGAGGGTCACATAGTAGTTCGGGCATGGGGTCAGAAGCCAAGCTTCCATAACTCAGTGACTAGTGCTTCTAACAGACATAGTAGGTTCATGAACCATTTATCATACTTATTTTGTAAGGAAAATAAAGACCCTGAGGCTGTGACTGCAATTCAACAAGATGTGAATTGCATGGATTTTGTGTTAGAAGTGGAAGACACCGGAAGAGGAATTCCTAAAGAGAAGCATAAGTCTGTGTTTGAGAATTATGTTCAGGTCAAAGAAACTGCACTTGGACAAGTGGGTACAGGCTTGGGACTTCGTATTGTGCAGTCCTTGGTACGCTTGATGCAAGGAGATATAGCAATTATGGACAAGGACATGGAAGAAAAAGGAACTTGCTTCAAGTTCAACGTCCTTCTTACCATTCTAACTCCTGGACGTAGTCCTAGCCCTAGGCCAGAGGGATTGTGTGTTGTTCTTTTGATTCAATACGAGGAGCGTCGAAGGACTTTACAGAAATTCATGGAGAGTGTAGGGATTGAAGTTAATGTTGTGAAGCAATGGGAACATCTATTTGATACACTCGAGAGAATCAAGCAGAAGAGAAGCAATTCCACACAAAGTTCTCTAGATTTGAGCGGTGTAGATGGAATTGATGATACAGGTTTCATTATGATTGTGATTGATGCAAATGCAGGGCCATTTGTAGAACTTTGCAGGATGGTTTGTGAATTTAGGAGAGGCCTTCATAGTGCTTGTAAGGTTGTGTGGTTAAACAAGCCACGTAGTGACAATCTGAGAGCCCTTGACATCGAGGATATGTTAGATCCAGAGGACATAGTCATATCCAAACCATTTCATGGGACTCGTTTGTTTCAAGTTCTAAAGCTTCTTCCTGAACATAGGCAACTCGATTCTAGCAGAGGCAGAGCAATAAGAGAAACTAATGTACCTCAATTTCAAAGTGTTGAACAATTCAGGAAGGAATCTTCTAGAGACTCTGCAATTGATAAAGATGAAATAAGAGAATGTGGTGACTCAAACTTTGACAATGCATTAAGTGGCAAGAAAATTTTGCTTGTTGAAGATAGTGAACTGACAGGCAAGGTAGCCATGCATGCTCTGAGACGGCTGGGTGCGACTGTTGAGCCATGCGAGAACGGTGAAGAAGCTGTGAAGCTAGTTGAAAATGGTCTAACCAGGGCTTTTCTCAATTTTCCTTATGATTACATCTTAATGGACTGTGAGATGCCTGTAATGGATGGATTTGAGGCAACGAGGAGGATAAGGGCGATGCAGAATAAGTATGGCGTTCGAATTCCTATCATTGCATTAAGCGGTCCTTCATGGTTAGACTTGGCCAACAGAACACAATCGACGGCGGATACAAATATACAGTTGGAAGTTGGAACTGAGAATGAGAGCGAAATGGGAGGCTCCAAAGGTACTGGGTCAAGACACCGCTCTGCAGCAGCTACAATCACCTTTTTGCTAGATGAGTTTCCAGAAGCTGGCTCCTCGCCCTCTGAGTATTTGACCGACCCAACTTATCCTCTCGTAAGGGGTTGCTCCTTGATGAGCTACTACTTCCATTACTCTCAGCCCTACGGTGCTTGCGTGTACCTTGAGGTAGAATCTGCTTCACTTCGTTGA 3174 0.408 MSSCLSMLFRPSSIVILLGSAALIVAIVLTPCWYFTLKHIEHHVNLNSQVSLFKLQSEIEDSAKLLQPLNSSSINIARLLSSNLSTNISFSEIQTKVAPVMFQAFETNPHLAEISFSGMEGLFFSYYTDHHRAYFAMYSNSSSSNETLYYIQRVNRDTGKLYGEAITSNVGRPSVNTSWIDEQVNSSYGSYASVGTMRSNGGKLLFISSVRITGGGAGVVSLGFPTKFIGDFIKRTIGGQGSSLMCLATKDGKVLVQGIQRTRMVFSNDMVTFRSLNPQTYYEVTVSCKDKVVASIWKTMDTQYLLYCSSIDIMGVHSVYVLAIPQNGLVHFVEKSRKEGLKLLIVVMVMMIFSFLSSVITLIKQMKATQEADRRMNKSLALASASHEIRNSLANLTGLIHMSYDEVVPASELDTHLKQMDFCTKDLLGLLNSILDLSKIEAGKMQLEEEEFDLSQLIEDVVDLYHPLAMEKGVDLILDPCDVSVVRYSSVKGDRGKLKQVLLNLLSNAVKFTDEGHIVVRAWGQKPSFHNSVTSASNRHSRFMNHLSYLFCKENKDPEAVTAIQQDVNCMDFVLEVEDTGRGIPKEKHKSVFENYVQVKETALGQVGTGLGLRIVQSLVRLMQGDIAIMDKDMEEKGTCFKFNVLLTILTPGRSPSPRPEGLCVVLLIQYEERRRTLQKFMESVGIEVNVVKQWEHLFDTLERIKQKRSNSTQSSLDLSGVDGIDDTGFIMIVIDANAGPFVELCRMVCEFRRGLHSACKVVWLNKPRSDNLRALDIEDMLDPEDIVISKPFHGTRLFQVLKLLPEHRQLDSSRGRAIRETNVPQFQSVEQFRKESSRDSAIDKDEIRECGDSNFDNALSGKKILLVEDSELTGKVAMHALRRLGATVEPCENGEEAVKLVENGLTRAFLNFPYDYILMDCEMPVMDGFEATRRIRAMQNKYGVRIPIIALSGPSWLDLANRTQSTADTNIQLEVGTENESEMGGSKGTGSRHRSAAATITFLLDEFPEAGSSPSEYLTDPTYPLVRGCSLMSYYFHYSQPYGACVYLEVESASLR 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3692 1057 PANTHER HISTIDINE KINASE CKI1-LIKE 39 713 - -
Sto13g3692 1057 PANTHER HISTIDINE KINASE CKI1-LIKE 728 954 - -
Sto13g3692 1057 SUPERFAMILY CheY-like 860 961 IPR011006 -
Sto13g3692 1057 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 493 648 IPR003594 -
Sto13g3692 1057 SMART HisKA_10 377 443 IPR003661 GO:0000155|GO:0007165
Sto13g3692 1057 Pfam Response regulator receiver domain 865 961 IPR001789 GO:0000160
Sto13g3692 1057 PANTHER TWO-COMPONENT HISTIDINE KINASE 728 954 - -
Sto13g3692 1057 PANTHER TWO-COMPONENT HISTIDINE KINASE 39 713 - -
Sto13g3692 1057 Gene3D - 844 968 - -
Sto13g3692 1057 CDD REC_hyHK_CKI1_RcsC-like 865 954 - -
Sto13g3692 1057 ProSiteProfiles Response regulatory domain profile. 864 989 IPR001789 GO:0000160
Sto13g3692 1057 CDD HisKA 378 439 IPR003661 GO:0000155|GO:0007165
Sto13g3692 1057 Gene3D - 359 444 - -
Sto13g3692 1057 SMART REC_2 863 976 IPR001789 GO:0000160
Sto13g3692 1057 Gene3D - 445 650 IPR036890 -
Sto13g3692 1057 ProSiteProfiles Histidine kinase domain profile. 384 649 IPR005467 -
Sto13g3692 1057 PRINTS Bacterial sensor protein C-terminal signature 573 587 IPR004358 GO:0016310|GO:0016772
Sto13g3692 1057 PRINTS Bacterial sensor protein C-terminal signature 591 601 IPR004358 GO:0016310|GO:0016772
Sto13g3692 1057 PRINTS Bacterial sensor protein C-terminal signature 607 625 IPR004358 GO:0016310|GO:0016772
Sto13g3692 1057 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 368 445 IPR036097 GO:0000155|GO:0007165
Sto13g3692 1057 Pfam His Kinase A (phospho-acceptor) domain 379 443 IPR003661 GO:0000155|GO:0007165
Sto13g3692 1057 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 432 644 IPR036890 -
Sto13g3692 1057 SMART HKATPase_4 493 649 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3692 Sto-Chr13 38929391 38937107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3692 10 954 Histidine Kinase Gene Family AT2G47430 37.982 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto13g3692 HATPase_c 5.6e-26 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3692 - - gmx:100790376 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3692 13 38929391 38937107 Sto13g3692 13 38929391 38937107 ECH