Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3663 ATGTCTGGCGATACTCATTTTCATAATTCCAACGTTCTGCTATGCAATGCAGGGGCAGGGGCAGCCGCCGGAGTTCTTGCTGCTACGTTTGTGTGTCCTTTAGATGTCATCAAAACTAGGTTTCAAGTTCATGGGCTGCCACAGCTCGCTAATGGAAGTATTAAAGGTAGTCTAATTGTCGGTAGTTTGGAACATATACTTCACAAAGAGGGATTCCGTGGCATGTACCGTGGTCTGGCTCCCACTGTGTTGGCATTACTTCCGAACTGGGCGGTTTATTTTACAGTGTATGAGCAGCTGAAGAGCGTTCTCTGTTCTGATGATGAACACCATCAGCTTTCATTTGGAGCTAACATGATAGCTGCTTCTGGTGCTGGGGCTGCAACTACCATTGCTACAAATCCACTTTGGGTTGTCAAGACCAGACTCCAAACCCAGGGAATGAGAACTGGTGTCATGCCATATAGAAGCACACTATCTGCCCTGAGGAGAATTGCTCATGAAGAGGGCATTCGAGGGTTGTACAGTGGCCTTGCACCTGCTCTTGCCGGTATCAGTCATGTTGCCATCCAGTTTCCAACATATGAGAAATTAAAATGTTACTTGGCAAACCGAGGTAGTTTCATGCTATTCCTATTTTTCTATGAACACTTGACAGTTTTGGAACTTGATTTATGGGATCATTATTTTGTATCAGATGGCACAACGGTGGATAAGCTTGGTGCTCGTGATGTTGCAATTGCCTCTTCAGTTTCTAAAATTTTTGCATCCACGTTGACATATCCCCATGAGGTTATAAGGTCCAGATTGCAAGAACAGGGGTATCACTCTGAGAGACGGTATTCTGGTACGATTGATTGCATTCGAAAGGTATTTCAGCAAGAGGGCCTGACTGGATTTTACCGAGGGTGTGCCATCAACCTTCTGAGGACAACACCAGCTGCTGGTTTTTGGGACAATTATTCGGTTGATGGCAGCCCACGCAGTGGGGCAGAAGCTAAGAACTCTCTCTAG 1014 0.4576 MSGDTHFHNSNVLLCNAGAGAAAGVLAATFVCPLDVIKTRFQVHGLPQLANGSIKGSLIVGSLEHILHKEGFRGMYRGLAPTVLALLPNWAVYFTVYEQLKSVLCSDDEHHQLSFGANMIAASGAGAATTIATNPLWVVKTRLQTQGMRTGVMPYRSTLSALRRIAHEEGIRGLYSGLAPALAGISHVAIQFPTYEKLKCYLANRGSFMLFLFFYEHLTVLELDLWDHYFVSDGTTVDKLGARDVAIASSVSKIFASTLTYPHEVIRSRLQEQGYHSERRYSGTIDCIRKVFQQEGLTGFYRGCAINLLRTTPAAGFWDNYSVDGSPRSGAEAKNSL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3663 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 240 327 IPR018108 -
Sto13g3663 337 SUPERFAMILY Mitochondrial carrier 15 318 IPR023395 -
Sto13g3663 337 Pfam Mitochondrial carrier protein 112 204 IPR018108 -
Sto13g3663 337 Pfam Mitochondrial carrier protein 16 105 IPR018108 -
Sto13g3663 337 Pfam Mitochondrial carrier protein 246 316 IPR018108 -
Sto13g3663 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 103 IPR018108 -
Sto13g3663 337 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085
Sto13g3663 337 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Sto13g3663 337 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Sto13g3663 337 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Sto13g3663 337 PRINTS Mitochondrial carrier protein signature 249 271 IPR002067 GO:0055085
Sto13g3663 337 Gene3D Mitochondrial carrier domain 10 323 IPR023395 -
Sto13g3663 337 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 1 207 - -
Sto13g3663 337 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 233 315 - -
Sto13g3663 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Sto13g3663 337 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 207 IPR044712 GO:0006862|GO:0055085
Sto13g3663 337 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 233 315 IPR044712 GO:0006862|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3663 Sto-Chr13 38774800 38778881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3663 1 315 Chloroplast and Mitochondria Gene Families AT2G47490 69.841 1.31e-146 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3663 K15115 - qsu:112024800 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3663 13 38774800 38778881 Sto13g3663 13 38774800 38778881 ECH