Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3650 ATGGATCTGTGTGTTACTTCTGTAGTGCGATCCACCATGTATGTCCCAGCAAGTGCAAGAAATAGAAAGACACTACCCTTGCTGGCCCTTTCTTCTCTACTCTCGCTTCTTCTCTTGGCACTCACACTCACAACAACAAAACCCCAACAATTGCAAACCCACCACCTTCATTACCACAAACACATTCAACTACCCCAATCCACATGCCATGGAACACTCTACCCACAACTCTGCCTCTCCACTCTCGCTTCCTTCCCAAATCTCACTTCCAAATCTCTCCCACAACTCATCTCTTCCCTCCTCAACCACACCCTCCACGAAGTCACATCCTCATCCTATAACTGCACCGCCATCCGAACCACCCTCACACATCTAAACACTTTCCAACACAGAGCCCTCGATGATTGCCTCAAGCTCTTTGACCACACTGTGGACTACCTCAATACCACCATAGCCCAACTCTCTCAACCCCCAATCACCTCCAAATCCCACCACCACTTGCACACTCTGTTAAGCGCCGCAATGACCAACATCTACACGTGTCTCGACGGCTTTGGTGACAGTGACACCAAAACTAGTACACCCAAGATCAGACACATAATAGAGAAGAGGTTGTTTCAGATTTGCTACCATGTCAGTAACTCACTGGCTATGCTCAAGAAAGTGGCTAGTAGGAACAAATTAGGGGCACACGCACATCACTCTCATGATGATCATAAACACGCCTTCCCTTCCTGGCTCTCCTCCAAAGACCGAAAGCTGCTTCAAGCTTCCGTGAATGAAACCAAGTTCGATGCTGTGGTAGCCAAAGATGGGACTGGCAATTTCACCACTATAGGGGAAGCACTAGCTGCTGCTCCTAATGACACCAATACCAGGAAGAAGACGAATGTGATGTTGGTTGGAGATGGGATTGGAAAGACCATAGTGAAAGCCAGTAGGAATGTTGTGGATGGGTGGACCACTTTCCAATCAGCTACTGTTGCGGTGGAGGGAGATAGGTTCATAGGGAAGGGCATAACGTTCGAGAACTCAGCGGGGCCCAGCAAACACCAAGCGGTGGCTCTTCGGAGTGACTCGGACTACTCTGTATTCTACAAATGCAGCTTCGTGGGGTACCAAGACACCCTCTACGTCCACTCCCTCCGTCAATTCTACCGCGAATGCGATATCTACGGCACCGTCGACTTCATCTTCGGAAACGCAGCCGTGGTTTTCCAGAAGTGCAACCTGTACGCGCGCAAGCCCGATCCCAATCAGAGGAACCTCTTCACGGCTCAAGGCAGAGAGGATCCGAATCAGAACACGGGCATTTCTATCCTCAACTCTAAAATCGCGGCTGCTTCGGATTTGGTCCCCCTCAAGTCCTCCTTCAAGTCTTACTTGGGGCGTCCCTGGAAGCAGTATTCGAGGACCGTGTATCTTGAATGTTATATGGAGGATTTGATTGATCCTGCGGGATGGTTGGAGTGGAATGGCTCTTTTGCCTTGAACACGCTCTACTATGCTGAGTACAACAACAAGGGTCCTGGTTCCAATACGAGTGCCAGAGTGAAATGGAGTGGCTATAAACTCATCAATTCCTCCACTGAGGCTTCTCAGTTTACTGTTGCTCAGTTCATACAAGGTTATGATTGGCTCAATACCACTGGTGTTCCTTTCTTCCCTAATCTCACTCCCTGA 1683 0.4926 MDLCVTSVVRSTMYVPASARNRKTLPLLALSSLLSLLLLALTLTTTKPQQLQTHHLHYHKHIQLPQSTCHGTLYPQLCLSTLASFPNLTSKSLPQLISSLLNHTLHEVTSSSYNCTAIRTTLTHLNTFQHRALDDCLKLFDHTVDYLNTTIAQLSQPPITSKSHHHLHTLLSAAMTNIYTCLDGFGDSDTKTSTPKIRHIIEKRLFQICYHVSNSLAMLKKVASRNKLGAHAHHSHDDHKHAFPSWLSSKDRKLLQASVNETKFDAVVAKDGTGNFTTIGEALAAAPNDTNTRKKTNVMLVGDGIGKTIVKASRNVVDGWTTFQSATVAVEGDRFIGKGITFENSAGPSKHQAVALRSDSDYSVFYKCSFVGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQKCNLYARKPDPNQRNLFTAQGREDPNQNTGISILNSKIAAASDLVPLKSSFKSYLGRPWKQYSRTVYLECYMEDLIDPAGWLEWNGSFALNTLYYAEYNNKGPGSNTSARVKWSGYKLINSSTEASQFTVAQFIQGYDWLNTTGVPFFPNLTP 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3650 560 Pfam Plant invertase/pectin methylesterase inhibitor 64 218 IPR006501 GO:0004857
Sto13g3650 560 PANTHER PECTINESTERASE 38 558 - -
Sto13g3650 560 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 66 222 IPR035513 -
Sto13g3650 560 SMART PMEI_2 60 218 IPR006501 GO:0004857
Sto13g3650 560 Pfam Pectinesterase 293 543 IPR000070 GO:0030599|GO:0042545
Sto13g3650 560 SUPERFAMILY Pectin lyase-like 263 556 IPR011050 -
Sto13g3650 560 ProSitePatterns Pectinesterase signature 2. 391 400 IPR033131 -
Sto13g3650 560 TIGRFAM PME_inhib: pectinesterase inhibitor domain 32 195 IPR006501 GO:0004857
Sto13g3650 560 Gene3D Invertase/pectin methylesterase inhibitor family protein 64 223 IPR035513 -
Sto13g3650 560 CDD PMEI-like_3 67 224 - -
Sto13g3650 560 PANTHER PECTINESTERASE 38 558 - -
Sto13g3650 560 Gene3D - 259 558 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3650 Sto-Chr13 38702422 38706630 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3650 89 554 Carbohydrate Esterase AT4G02320 50.810 2.00e-171 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3650 K01051 - gmx:100802881 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0466 8 2873500 2877672 Sto13g3650 13 38702422 38706630 CCT
Sto13g3650 13 38702422 38706630 Sto13g3650 13 38702422 38706630 ECH