Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3645 ATGAGAAAACTTGGGGAGCATGAAATATGGGTGAAAGACATGGTGACAGTGAGTCAAGACGGAAGCGGAAACTTCACGACCATCAACGACGCCGTTTCTGCTGCTCCCAACAGGTCTTTCCCTACGGATGGCTACTTCGTGATCTACGTCAGAGCGGGCGTTTACGAAGAATACGTCTCCATCCATAAGAAAAAGCCAAAGCTGATGATGATCGGAGAAGGCATCAATAAAACTATCATCACAGGAGATCACAGCGTCTTGAATCACTACTTGACAACCTTCCACACAGCAACCTTCGGCGTGAATGGGTTTGGATTCGTGGGGGTGGGCATGACATTTCGAAACACAGCGGGGCCGGAGATGCACCAAGCAGTGGCAGTTCGAAACAGCGCGGATCAATCAACGTTTTACAGGTGTAGCTTCGAGGGATACCAAGACACCTTATACGCACATTCCCTCAGACAATTCTACAGAGAATGTGACATCTACGGCACTGTGGATTTCATCTTCGGAAACGCTGGCGCTGTATTCCAAAACTGCAACATTTTGGTTCGTAAGCCCATGAGCGGGCAGTTCAACGCCATCATCGCACAAGGACGAAACGATAGCAATCAGAACACGGGGATCTCCATCCATAATTGTAGCATTAGAGCGGCTGAAGATTTGGGTGTGGCAGCCACATATCTAGGAAGGCCGTGGAAGGAGTACTCCAGGACGGTTTACATGCAGAGCGAGATAGAGAGGCTGATCGATGCCAGTGGTTGGCATGTATGGAATGCATCAGATTTTGCGTTGGCCACTTTGTATTACGCCGAGTTTAACAACACTGGGCCCGGCTCCAGCACCACCCTCAGGGTCACCTGGCCCGGCTACCATGTCATTAATGTTACCGATGCAGCTAAATTCACTGTAGCCAACTTCCTCTTTGGGGATGAATGGCTGCCCCAAACTGGGGTCTCTTACACCAGTAACTTCGTCTGA 981 0.4985 MRKLGEHEIWVKDMVTVSQDGSGNFTTINDAVSAAPNRSFPTDGYFVIYVRAGVYEEYVSIHKKKPKLMMIGEGINKTIITGDHSVLNHYLTTFHTATFGVNGFGFVGVGMTFRNTAGPEMHQAVAVRNSADQSTFYRCSFEGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAGAVFQNCNILVRKPMSGQFNAIIAQGRNDSNQNTGISIHNCSIRAAEDLGVAATYLGRPWKEYSRTVYMQSEIERLIDASGWHVWNASDFALATLYYAEFNNTGPGSSTTLRVTWPGYHVINVTDAAKFTVANFLFGDEWLPQTGVSYTSNFV 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3645 326 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 8 324 - -
Sto13g3645 326 Pfam Pectinesterase 15 310 IPR000070 GO:0030599|GO:0042545
Sto13g3645 326 ProSitePatterns Pectinesterase signature 2. 162 171 IPR033131 -
Sto13g3645 326 Gene3D - 9 325 IPR012334 -
Sto13g3645 326 SUPERFAMILY Pectin lyase-like 10 323 IPR011050 -
Sto13g3645 326 PANTHER PECTINESTERASE 8 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3645 Sto-Chr13 38679737 38680785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3645 2 326 Carbohydrate Esterase AT4G02330 64.671 1.18e-154 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3645 K01051 - gmx:100780568 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3645 13 38679737 38680785 Sto13g3645 13 38679737 38680785 ECH