Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3638 ATGAGCCGCGGGACAGCAACAGGAGccaaggggaagaagaagggagcCAGCTTCGTGATCGACTGCGCGAAGCCGGTGGAAGATAAGATCATGGACATCGCCTCCCTCGAGAAGTTCCTTCAGGAGAGGATTAAAGTTGGCGGCAAGGCCGGTGCCCTCGGTGATTCCGTCACTGTCACTCGTGATAAGAGCAAGATTACCGTCACTTCCGACAGCAATTTCTCTAAGAgGTATCTGAAATACTTAACAAAGAAGTACCTGAAGAAGCACAATGTGAGGGATTGGCTACGTGTGATTGCCTCCAACAAGGACAGGAGTATCTACGAGTTAAGATACTTCAATATCGCTGAGAACGAGGGTGAGGAGGAAGACTAA 375 0.464 MSRGTATGAKGKKKGASFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTRDKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEGEEED 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3638 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
Sto13g3638 124 PANTHER 60S RIBOSOMAL PROTEIN L22 1 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
Sto13g3638 124 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 124 - -
Sto13g3638 124 Gene3D - 5 124 IPR038526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3638 Sto-Chr13 38626471 38628046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3638 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 87.097 3.42e-67 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3638 K02891 - gmx:100305544 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3638 13 38626471 38628046 Sto13g3638 13 38626471 38628046 ECH
Sto8g0482 8 2977702 2980306 Sto13g3638 13 38626471 38628046 ECH