Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3625 ATGTCTTCTTCTGCAACTTGGATCACATCCCTCTCATGTTCTTCCCCTGTTAAACAAGCTTCAGGGGATACCTTCCTCTCAACTCTCCCTCTATGGCTCAGATATATTTTCCTCTCTCCATGCCCTCAGAGAGCTCTCTTCTCAGCACTTGACGCTCTacttctcctcctccttctcgtGCTTGCCCTCAAGAAGCTTTATTCCCGGTTCACCTCCAATGCCCACCCACCATCATCTGAACTCAACAAGCCCTTAATCAATCATAACAGAGCTTTTCTCAGAACAACTATATGGTTTAAGCTAACTCTAACCGTGACGCTTCTTTTGGCTCTATTGTACACAGTAGCATGCGTTTTGGTATTTGTAAGAACCACCCAATCTCCATGGAAGTTAGGTGATGGTATTTTCTGGTTACTTCAGGCGTTTACTCATGTGGTTCTTGCAATCTTAATCCTCCATGAAAAAAGATTTCAAGCTATTGTTCATCCAATTCCGCTTCGAATCttttggatactaaacttgatTATCGTGTCCTTGTTCGTAGCATCTGGGTTTATACGTTTGGTGTTTGTGGGAGAACCCGGAGAGTTCAGCTTTAAGATGGATGACATAGTGtccttcatttctttccctctttCACTTTTTCTCTTTTGTGTTGCCATTAAGGGTTCTACTGGCATTAGGTGCACCCAGGAAACACAACCACTGATTGATGGGGAAATTCATTTGTACGATTCTTCCTCGAGCAAATCAAACGTGACTGGCTTTGCTTCGGCTTCTTTAGTATCCAAGGCCTTTTGGCTATGGATAAATCCCTTGTTGAGTAAAGGGTACAAATCGCCTTTGAAGATTGATCAAGTTCCAACACTTTCACCGCAACATAAAGCCGAAGTTATGTCCGTTCTGTTTGAATCCAAATGGCCTAAACCTGGAGAAACGTCGAAGCACCCTGTTCTAACCACATTGCTCCGATGCTTCTGGAAGGAAGTAGCCTTCACTGCATTCCTCGCGGTTGTTCGCCTCAGTGTCATGTTTGTAGGTCCTGTTCTTATACAGAGCTTTGTTGATTTCACAGCAGGGAAGAGAAGCTCTGATTATGAAGGATACTACCTCGTTTTGATCCTTCTCATTGCTAAATTCGTAGAAGTTTTGACCACTCATCATTTCAACTTCAACTCTCAAAAGCTTGGGATGCTTATCCGATGCACTCTCATTACCTCATTGTACAAGAAGGGGTTGAGGTTGTCGTGCTCTGCTCGACAGGATCACGGCGTGGGAACCATTGTGAATTACATGGCTGTGGATGCACAACAACTCTCTGATATGATGTTGCAGCTTCATGCCATATGGATGATGCCATTTCAAGTTGGAATTGCCTTGTTTCTGCTTTATAGGTCCTTAGGTGCCTCGGTGGTCACGGCTCTTCTTGGAATTCTTGGTGTTCTTGTGTTTGTTGTGATTGGCACGCGAAGAAACAACCGTTTCCAATTCAATGTGATGAAGAATCGGGATTCGAGAATGAAGGCTGTGAATGAGATGCTTAATTACATGCGTGTGATCAAGTTCCAGGCATGGGAAGAGCATTTCAACAAGAGGATTATGGGTTTCCGTGGGTCAGAATTTGAGTGGCTTTCAAAGTTTATGTATTCAATTTCTGGCAATATCGTTGTGATGTGGAGCACACCTCTGTTGATATCAACTTTAACGTTCGCAACGGCGATTTGGCTTGGTGTCCCACTTGATGCAGCCACAGTTTTCACCACAACTACGATCTTTAAAATATTGCAGGAACCCGTTAGGACATTCCCACAATCTATGATCTCTCTTTCTCAAGCAGTGATATCACTTGGGAGGTTGGATGGGTACATGATGAGTAGAGAATTGTCTATTAATTCAGTTGAGAGAGAAGAAGGGTGTGGTGGAACAACTGCTGTAGAGGTCAAAGATGGAATCTTTAGTTGGGATGATGATAATAGGGGTGAGTATGACTTGAAAAGTATTAATTTGGAGATCAAGAAAGGGGATCTTACGGCTATTGTTGGGACCGTTGGCTCTGGGAAGTCTTCTCTGCTTGCTTCAGTTTTGGGTGAGATGCATAAAGTTTCTGGAAAGGTTCGGGTTTGCGGGAGCATTGCCTATGTGGCACAAACATCATGGATTCAAAACGGGACAATACAAGAAAACATCCTTTTTGGATTACCTATGGACAGACAAAAGTACAATGAAGTAGTGAGAGTATGTTGTTTGGAGAAGGACTTGGAAATGATGGAGGATGGGGATCAAACAGAGATTGGAGAGCGTGGCATCAACCTTAGTGGAGGTCAAAAGCAACGGATACAACTCGCCAGGGCTGTGTATCAAGACACTGATATATATCTTCTTGACGATGTCTTTAGTGCGGTTGATGCTCATACTGGCTCTGAAATCTTCAAGGAATGTGTGAGGGGAGCTCTGAAAGGCAAGACCATTATTCTTGTCACACACCAAGTGGACTTTTTGCACAATGTTGATCTTATATTAGTGATGAGGGATGGAATGATAGTCCAATCAGGGAAGTACAATGATCTACTAAATTTAGGAATGGATTTTGGAGCTTTGGTAGCTGCACATGAGACTTCTATGGAACTTGTAGAAGAGGGTGCACTCATGCCTGGTGAAAATTCACCAAGACCATCCAAATCGCCTAGATCTCCAAAACCACCTTCTAATTATATGGAAACTAATGGTGAAAGGAATTCTGTTGACCGACCTAAGGAAAGTTCTAAACTCATCAAAGAAGAGGAGAGGGAAACTGGGAAAGTGAGCTTGCATATCTATAAACTCTATTGCACAGAGGCATTTGGGTGGTGGGGCATTATAGGAATACTGCTCCTTTCTTTTATATGGCAAGGATCTCTAATGGCAGGTGACTATTGGCTGGCATATGAAACTGGAGAAGAGAGAGCCAAGTTCTTCAACCCTTCTTTGTTTATCTCTGTCTACGGAATTATTGCCATAGTTTCAATTGTTTTGGTGGTGATAAGAGCCTTCGCCATTTGCGTCTTGGGGTTGAAGACAGCAAAACTTTTCTTCACACAAATTCTTAATTGCATTTTGCATGCTCCCATGTCTTTCTTTGATACTACGCCTTCAGGAAGAATTTTAAGTAGGGCATCCACGGATCAGACCAATGTTGATTTCCTTATCCCTTTGTTCATGAGCTTTGTAATTTCCATGTACATCACGGTGCTAAGCATCTTCATCGTAACATGTCAAAACTCTTGGCCAACAATTTTCTTGCTGATTCCTCTTATTTGGTTGAATATATGGTACCGGGGTTATTTCCTTGCTTCGTCTCGCGAATTGACTCGCCTGGATCAAATAACAAAAGCACCTGTCATTCATCACTTCTCAGAAAGCATTTCAGGGGTGATGACTATCCGTGCATTCAGAAAGCAGGAGAaattttgtgaagaaaatgtCAAACGAGTGAATGCTAATTTGCGAATGGATTTCCACAACAATGGTTCCAATGAGTGGCTGGGTTTTCGCTTAGAATTGCTTGGAAGCATAGTTTTTTGCTTATCCGCTCTGTTCATGATCTTGTTACCCAGCAGTATCATAAAGCCAGAAAATGTTGGTTTAAGTCTATCTTATGGATTATCCCTGAATGGTGTGATGTTTTGGGCTATATACATGAGTTGCTTCCTTGAAAACAAAATGGTATCTGTTGAGAGGATTAAACAATTCACAGTAATTCCATCAGAAGCAGAATGGAATATTAAAGATCGTCTGCCTCCTCCAAATTGGCCTGCACATGGCAACGTGAATATCAAAGATTTGCAGGTCAGGTATCGTCCAAACACTCCTTTGGTTCTCAAAGGCATTACTCTGAGCATTAATGGGGGTGAAAAGATTGGAGTTGTTGGTCGAACCGGGGGCGGAAAATCAACATTAATTCAAGTTTTCTTTAGGTTGGTGGAACCTTCAGGAGGAAGAATAATTATTGACGACATCGACATAACTGCGTTAGGGCTTCATGATCTCAGATCTCGGTTCGGTATTATTCCCCAAGAACCAGTCCTTTTCGAGGGAACCGTAAGAAGTAACATCGATCCAACTGAACAATACACAGATGAGGAGATATGGAAGAGCTTGGAACGCTGTCAACTAAAGGATGCGGTGGCTTCAAAGCCAGAAAAACTTGATTCTTTAGTGGTTGATAATGGAGAGAATTGGAGTGTGGGACAGAGGCAGTTGCTGTGTCTGGGGAGGGTTATGCTTAAGCGAAGCCGTCTCTTATTCATGGATGAAGCAACGGCTTCTGTGGATTCACAAACTGATGCAGTGATTCAGAAGATCATAAGAGAAGATTTCGCAGCATGTACCATCATAAGCATTGCTCACAGAATACCAACAGTCATGGATTGTGATAGGGTGCTGGTCGTTGATGCAGGACGAGTAAAAGAATTTGATAAACCCTCCAACTTGCTTACAAGGCCGTCCTTGTTTGGAGCATTAGTTCAAGAATATGCCAACCGTTCCTCCGGACTCTGA 4536 0.4202 MSSSATWITSLSCSSPVKQASGDTFLSTLPLWLRYIFLSPCPQRALFSALDALLLLLLLVLALKKLYSRFTSNAHPPSSELNKPLINHNRAFLRTTIWFKLTLTVTLLLALLYTVACVLVFVRTTQSPWKLGDGIFWLLQAFTHVVLAILILHEKRFQAIVHPIPLRIFWILNLIIVSLFVASGFIRLVFVGEPGEFSFKMDDIVSFISFPLSLFLFCVAIKGSTGIRCTQETQPLIDGEIHLYDSSSSKSNVTGFASASLVSKAFWLWINPLLSKGYKSPLKIDQVPTLSPQHKAEVMSVLFESKWPKPGETSKHPVLTTLLRCFWKEVAFTAFLAVVRLSVMFVGPVLIQSFVDFTAGKRSSDYEGYYLVLILLIAKFVEVLTTHHFNFNSQKLGMLIRCTLITSLYKKGLRLSCSARQDHGVGTIVNYMAVDAQQLSDMMLQLHAIWMMPFQVGIALFLLYRSLGASVVTALLGILGVLVFVVIGTRRNNRFQFNVMKNRDSRMKAVNEMLNYMRVIKFQAWEEHFNKRIMGFRGSEFEWLSKFMYSISGNIVVMWSTPLLISTLTFATAIWLGVPLDAATVFTTTTIFKILQEPVRTFPQSMISLSQAVISLGRLDGYMMSRELSINSVEREEGCGGTTAVEVKDGIFSWDDDNRGEYDLKSINLEIKKGDLTAIVGTVGSGKSSLLASVLGEMHKVSGKVRVCGSIAYVAQTSWIQNGTIQENILFGLPMDRQKYNEVVRVCCLEKDLEMMEDGDQTEIGERGINLSGGQKQRIQLARAVYQDTDIYLLDDVFSAVDAHTGSEIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMRDGMIVQSGKYNDLLNLGMDFGALVAAHETSMELVEEGALMPGENSPRPSKSPRSPKPPSNYMETNGERNSVDRPKESSKLIKEEERETGKVSLHIYKLYCTEAFGWWGIIGILLLSFIWQGSLMAGDYWLAYETGEERAKFFNPSLFISVYGIIAIVSIVLVVIRAFAICVLGLKTAKLFFTQILNCILHAPMSFFDTTPSGRILSRASTDQTNVDFLIPLFMSFVISMYITVLSIFIVTCQNSWPTIFLLIPLIWLNIWYRGYFLASSRELTRLDQITKAPVIHHFSESISGVMTIRAFRKQEKFCEENVKRVNANLRMDFHNNGSNEWLGFRLELLGSIVFCLSALFMILLPSSIIKPENVGLSLSYGLSLNGVMFWAIYMSCFLENKMVSVERIKQFTVIPSEAEWNIKDRLPPPNWPAHGNVNIKDLQVRYRPNTPLVLKGITLSINGGEKIGVVGRTGGGKSTLIQVFFRLVEPSGGRIIIDDIDITALGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTEQYTDEEIWKSLERCQLKDAVASKPEKLDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFMDEATASVDSQTDAVIQKIIREDFAACTIISIAHRIPTVMDCDRVLVVDAGRVKEFDKPSNLLTRPSLFGALVQEYANRSSGL 1511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3625 1511 SUPERFAMILY ABC transporter transmembrane region 319 623 IPR036640 GO:0005524|GO:0016021
Sto13g3625 1511 Gene3D - 626 881 IPR027417 -
Sto13g3625 1511 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1269 1503 IPR003439 GO:0005524
Sto13g3625 1511 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 90 1510 - -
Sto13g3625 1511 CDD ABC_6TM_ABCC_D1 332 619 IPR044746 GO:0140359
Sto13g3625 1511 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 331 611 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto13g3625 1511 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 90 1510 - -
Sto13g3625 1511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 643 866 IPR027417 -
Sto13g3625 1511 Pfam ABC transporter 1286 1434 IPR003439 GO:0005524
Sto13g3625 1511 Pfam ABC transporter 664 797 IPR003439 GO:0005524
Sto13g3625 1511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1261 1502 IPR027417 -
Sto13g3625 1511 Pfam ABC transporter transmembrane region 332 598 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto13g3625 1511 Pfam ABC transporter transmembrane region 985 1207 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto13g3625 1511 MobiDBLite consensus disorder prediction 911 925 - -
Sto13g3625 1511 MobiDBLite consensus disorder prediction 882 925 - -
Sto13g3625 1511 SMART AAA_5 1295 1479 IPR003593 -
Sto13g3625 1511 SMART AAA_5 673 854 IPR003593 -
Sto13g3625 1511 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 645 869 IPR003439 GO:0005524
Sto13g3625 1511 CDD ABCC_MRP_domain2 1267 1487 - -
Sto13g3625 1511 CDD ABCC_MRP_domain1 645 845 - -
Sto13g3625 1511 Gene3D ABC transporter type 1, transmembrane domain 914 1250 IPR036640 GO:0005524|GO:0016021
Sto13g3625 1511 Gene3D ABC transporter type 1, transmembrane domain 308 625 IPR036640 GO:0005524|GO:0016021
Sto13g3625 1511 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 953 1232 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto13g3625 1511 CDD ABC_6TM_ABCC_D2 952 1244 IPR044726 GO:0140359
Sto13g3625 1511 ProSitePatterns ABC transporters family signature. 771 785 IPR017871 GO:0005524
Sto13g3625 1511 Gene3D - 1253 1501 IPR027417 -
Sto13g3625 1511 SUPERFAMILY ABC transporter transmembrane region 949 1249 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3625 Sto-Chr13 38553991 38559578 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3625 1267 1493 Calmodulin-binding Proteins AT2G36910 30.870 1.14e-29 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3625 - K05666 gmx:100793361 2376.67