Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3622 ATGTCTTCTGCAATTTGGATCATATCCATCTCATGTTCGTCCCCTGTTAAACAAGCTTCAGGGGATACTTTCCTCTCAACTCTGCTCCAATGGCTGAGATTTGTTTTCCTCTCTCCATGCCCTCAGAGAGCTCTCTTTTCAGCCGTTGAAGTGTCACTCCTCCTCGTCTTTCTCGTGCTTGCTCTCAAGAAGCTCTATTCCAGGTTCGCCTCCAATGGGGACGCCCCAACTTCTGAAATTAACAAGCCCTTAATCACTCATAACAGAGCTTTTGTCGTAACAACTGCATGGTTTAAGCTAACTCTTACTGTGACGCTTCTTTTGGCTATATTGTACACTGTAGCATGTGTTGCGGTATTTGTAAGATCCACCCAAGTTCCATGGAAGCTACTTGATGGTATTTTCTGGTTGGTTCAGGCTCTTACTCATGTGGTTCTTGCAATCTTAATCATCCATGAAAAAAGATTTCAAGCTATTGTTCATCCAATTCCTCTTCGAATCttttggatactaaacttgatTATCACGTCCTTGTTCGTAGCATCCGggtttatacgtttggtttttGTGGAAGAAACCGGAGATTACAGCTTTAAGATGGATGACGTAGTCtccttcatttctttccctctttCACTTTTTCTCTTTTGTGTTGCCATTAAAGGATCTACTGGCATTTGCTCAACTCAGGAGACGCAACCACTGATTGATGCTGAAACTAAATTATATGATCCTTCTTTGAGCAAATCGAATGTGACTGGCTTTGCATCGGCTTCTTTAGTATCCAAGGCCTTTTGGCTGTGGATAAATCCATTGTTGAGTAAAGGGTACAAATCGCCTCTTGAGATTGATCAAGTTCCAACACTTTCGCCACAACATAGAGCTGAAGTTATGTCAGTACTGTTTGAATCCAAATGGCCTAAACCACAAGAAAGGTCGAAGCACCCTGTTCTAACCACATTGCTCCGATGCTTATGGAAGGAAGTAGCCTTCACTGCATTCCTTGCGGTGGTTCGGCTATGTGTTATGTTTGTAGGTCCGGTTCTTATCCAGAGCTTTGTTGATTTCACATCGGGGAAGAGAAGCTCAATGTATGAAGGATACTACCTCGTGTTAATCCTTCTCACTGCTAAATTTATAGAAGTGTTGTCCTCTCATCATTTCAACTTCAACTCTCAGAAACTTGGGATGCTCATCCGATGCACTCTCATTACCTCGTTGTACAAGAAGGGACTGAGGTTGTCGTGCTCTGCTCGACAAGATCACGGTGTTGGAACCATTGTGAATTACATGTCTGTGGATGTACAACAACTCTCTGACATGATGCTGCAGCTACATGCCGTGTGGATGATGCCCATTCAGGTTGGAATTGCCTTAATTATGCTTTATAGGTACTTGGGTCCCTCGGTGGTCACTGCTCTGTTTGGATTTCTTGGTGTTCTTGCGTTTGCTGTGTATAGCACTCGAAGGAACAACCGTTTCCAATATAACTTGATGAAGAATCGTGATTCCAGGATGAAAGCCGTGAATGAGATGCTTAATTATATGCGGGTGATTAAGTTCCAAGCATGGGAAGAGCATTTCAACAGAAGGATTTCGAGTTTTCGTCAGTCAGAATTTGAATGGCTTTCCAAGTTTTTGTACTCTTTTTCTGGAAATATCATTGTGACATGGAGCGCACCATTGCTGGCATCAACTTTAACATTCGGAACGGCAATTTTGCTAGGAGTTCCACTTGATGCAGCGACGGTTTTCACCGCAACatcgatttttaaaatattgcagGAGCCCATTCGGTCATTTCCACAGTCTATGATTTCTCTTTCACAAGCAGTGATTTCGCTTGGGAGGTTGGATAGGTACATGATGAGTGGAGAATTATCTGATGGTTCAGTAGAGAGAGAGGAAGGGTGTGATGGAACAACTGCTGTGGAGGTTAGAGACGGAATCTTCAGATGGGACGATGATAGCAAGGGAGATTATGACTTGAAAAACATTAACTTGGAGATCAAGAAAGGGGATCTTACAGCTATTGTTGGGACAGTTGGGTCAGGGAAGTCTTCTCTCCTTGCATCTATTCTTGGTGAGATGCATAGAGTTTCAGGAAAGGTTTGGGTTTGTGGGAGCACTGCATATGTGGCACAAACATCATGGATTCAAAATGGAACAATAGAGGAGAACATTTTATTTGGATTACCAATGGACAGACAGAAGTACAATGAAGTAGTGAGAGTATGTTGTTTGGAGAAGGACTTGGAAATGATGGAGGATGGGGATCAAACAGAGATTGGAGAGCGTGGTATCAACCTTAGTGGAGGTCAAAAGCAACGAATACAATTGGCCAGGGCTGTGTATCAAGACTGTGATATCTATCTTCTTGACGATGTCTTCAGTGCAGTTGATGCTCATACTGGCTCTGAATTATTCAAGGAATGTGTGAGGGGAGCTCTAAAAGGCAAGACTATTATTCTTGTCACACACCAAGTGGACTTCTTGCATAATGTTGATCTTATATTTGTGATGCGGGATGGAATGATAGTTCAATCGGGGAAGTACAATGATCTACTAAATTTTGGAATGGATTTTGGAGATTTAGTAGCTGCACATGAGACTTCTATGGAACTTGTAGAAGAGGGTTCGGTCATGCCTGGTGAAAGTTCCCCCAAACCATCCAAATCACCTAGAACTCCAAAGTCAACTTCTAATAATAAAGAGATCAATGGTGAAAGGAATTTTATTAACCAACTTAAAGAAAGATCTAAACTCATCAAAGACGAGGAGAGGGAAACTGGAAAAGtgaacttgcatatttataaaCTCTATTGCACAGAGGCTTATGGGTGGTGGGGCATTATAGCAGTATTGTTTTTCTCTATAACGTGGCAAGCATCTCTATTGGCATGTGATTACTGGCTGGCATATGAAACTGCAGAAGAGCGAGTTCAACTATTTAACCCTTCTATTTTTATCTCTGTCTACTTAATTTTGTCTATAATTTCAATTGGTTTGGTGGCAATAAGGGCCATCTCTGTTTTCGCCCTGGGGCTGAAGACAACACAAATTTATTTCACACAAATTCTTAATTGCATCTTGCATGCCCCCATGTCTTTCTTTGATACTACGCCTTCGGGAAGAATTTTAAGCAGGGCATCCTCAGATCAGACCAATGTTGATTTGTTTATTCCTATGTTTGTGGGTTTTGTTATTAACACGTACCTTACAGTGGCCGGCATTCTCATCGTCATTTGTCAAAACTCTTGGCCAACAGTTTTCTTGTTGATTCCTCTTATTTGGTTGAATATATGGTACCGGGGTTATTTCCTTGCGTCATCTCGTGAATTGACCCGTCTGGATCAAATAACAAAAGCACCTGTCATTCATCATTTCTCAGAAAGCATCGCAGGGGTTATGACAATTCGTGCATTTAGGAAGCAGGGGGAGTTTTGTGAAGAAAATGTTAAACGATTGAATTTTAATCTGCGAATGGATTTCCATAATTTTAGTTCTAATGAGTGGCTGGGTTTTCGCTTAGAATTGCTGGGAAGCTTAGTTTGTTGCATGTCAGCTATGTTCATGATCTTGTTACCAAGCAGTATTATAAAGCCAGAAAATGTTGGTTTGAGTCTATCTTATGGATTATCCCTGAATGCTGTGTTATTCTATGCTATATACATGAGCTGCTTCCTTGAAAACAAAATGGTTTCTGTTGAGAGGATTAAGCAGTTCACAGTAATTCCACCAGAAGCAGCATGGAATTTGAAAGATCGTATGCCTCCTCCAAATTGGCCAGCCCATGGCAATGTTAATATCAAAGATTTGCAGGTGAGGTATCGTCCAAACACTCCTCTAGTTCTCAAAGGCATTACAGTGAGCATTGATGCTGGCGAAAAGATTGGCGTTGTTGGTCGAACAGGGAGTGGAAAATCAACATTAATTCAAGTTTTGTTTAGGCTGGTGGAACCTTCAGGAGGGAGAATAATTGTTGATGACATTGATATAACTGCCTTGGGGCTTCATGACCTTAGATCTCGTTTTGGTATAATTCCCCAAGAGCCTGTACTTTTTGAGGGAACCGTCAGAAGTAACATTGATCCAATTGGACAGCACACAGACGATGAGATATGGATGAGTTTGGAACGTTGTCAACTAAAAGACGCGGTGGCTTCAAAGCCAGAGAAACTTGATTCATTAGTGGTTGATAATGGAGAGAACTGGAGTGTGGGACAGAGGCAATTGTTGTGTCTGGGGAGGGTTATGCTTAAGCGAAGCCGTCTGTTGTTCATGGACGAAGCAACAGCTTCTGTGGATTCACAAACTGATGCTATGATTCAGAAGATCATAAGAGAGGACTTTGCAGCATGTACCATCATCAGCATTGCTCACAGAATACCAACAGTTATGGATTGTGATAGGGTTTTGGTGGTAGATACAGGGCGAGCAAAAGAATTTGATAAACCCTCCAACTTGCTTGCGAGGCCATCACTGTTTGGAGCATTAGTTCAAGAATATGCAAATCGTTCCTCTGAACTCTAA 4533 0.4108 MSSAIWIISISCSSPVKQASGDTFLSTLLQWLRFVFLSPCPQRALFSAVEVSLLLVFLVLALKKLYSRFASNGDAPTSEINKPLITHNRAFVVTTAWFKLTLTVTLLLAILYTVACVAVFVRSTQVPWKLLDGIFWLVQALTHVVLAILIIHEKRFQAIVHPIPLRIFWILNLIITSLFVASGFIRLVFVEETGDYSFKMDDVVSFISFPLSLFLFCVAIKGSTGICSTQETQPLIDAETKLYDPSLSKSNVTGFASASLVSKAFWLWINPLLSKGYKSPLEIDQVPTLSPQHRAEVMSVLFESKWPKPQERSKHPVLTTLLRCLWKEVAFTAFLAVVRLCVMFVGPVLIQSFVDFTSGKRSSMYEGYYLVLILLTAKFIEVLSSHHFNFNSQKLGMLIRCTLITSLYKKGLRLSCSARQDHGVGTIVNYMSVDVQQLSDMMLQLHAVWMMPIQVGIALIMLYRYLGPSVVTALFGFLGVLAFAVYSTRRNNRFQYNLMKNRDSRMKAVNEMLNYMRVIKFQAWEEHFNRRISSFRQSEFEWLSKFLYSFSGNIIVTWSAPLLASTLTFGTAILLGVPLDAATVFTATSIFKILQEPIRSFPQSMISLSQAVISLGRLDRYMMSGELSDGSVEREEGCDGTTAVEVRDGIFRWDDDSKGDYDLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHRVSGKVWVCGSTAYVAQTSWIQNGTIEENILFGLPMDRQKYNEVVRVCCLEKDLEMMEDGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSELFKECVRGALKGKTIILVTHQVDFLHNVDLIFVMRDGMIVQSGKYNDLLNFGMDFGDLVAAHETSMELVEEGSVMPGESSPKPSKSPRTPKSTSNNKEINGERNFINQLKERSKLIKDEERETGKVNLHIYKLYCTEAYGWWGIIAVLFFSITWQASLLACDYWLAYETAEERVQLFNPSIFISVYLILSIISIGLVAIRAISVFALGLKTTQIYFTQILNCILHAPMSFFDTTPSGRILSRASSDQTNVDLFIPMFVGFVINTYLTVAGILIVICQNSWPTVFLLIPLIWLNIWYRGYFLASSRELTRLDQITKAPVIHHFSESIAGVMTIRAFRKQGEFCEENVKRLNFNLRMDFHNFSSNEWLGFRLELLGSLVCCMSAMFMILLPSSIIKPENVGLSLSYGLSLNAVLFYAIYMSCFLENKMVSVERIKQFTVIPPEAAWNLKDRMPPPNWPAHGNVNIKDLQVRYRPNTPLVLKGITVSIDAGEKIGVVGRTGSGKSTLIQVLFRLVEPSGGRIIVDDIDITALGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQHTDDEIWMSLERCQLKDAVASKPEKLDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFMDEATASVDSQTDAMIQKIIREDFAACTIISIAHRIPTVMDCDRVLVVDTGRAKEFDKPSNLLARPSLFGALVQEYANRSSEL 1510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3622 1510 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 330 610 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto13g3622 1510 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 952 1231 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto13g3622 1510 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1268 1502 IPR003439 GO:0005524
Sto13g3622 1510 Gene3D - 625 881 IPR027417 -
Sto13g3622 1510 Gene3D ABC transporter type 1, transmembrane domain 303 624 IPR036640 GO:0005524|GO:0016021
Sto13g3622 1510 Gene3D ABC transporter type 1, transmembrane domain 913 1249 IPR036640 GO:0005524|GO:0016021
Sto13g3622 1510 SUPERFAMILY ABC transporter transmembrane region 948 1248 IPR036640 GO:0005524|GO:0016021
Sto13g3622 1510 CDD ABCC_MRP_domain2 1266 1486 - -
Sto13g3622 1510 CDD ABCC_MRP_domain1 644 844 - -
Sto13g3622 1510 CDD ABC_6TM_ABCC_D1 331 618 IPR044746 GO:0140359
Sto13g3622 1510 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 89 1509 - -
Sto13g3622 1510 Pfam ABC transporter 1285 1433 IPR003439 GO:0005524
Sto13g3622 1510 Pfam ABC transporter 663 796 IPR003439 GO:0005524
Sto13g3622 1510 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1260 1501 IPR027417 -
Sto13g3622 1510 CDD ABC_6TM_ABCC_D2 947 1243 IPR044726 GO:0140359
Sto13g3622 1510 MobiDBLite consensus disorder prediction 877 905 - -
Sto13g3622 1510 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 642 866 IPR027417 -
Sto13g3622 1510 SMART AAA_5 672 853 IPR003593 -
Sto13g3622 1510 SMART AAA_5 1294 1478 IPR003593 -
Sto13g3622 1510 MobiDBLite consensus disorder prediction 886 905 - -
Sto13g3622 1510 Pfam ABC transporter transmembrane region 985 1204 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto13g3622 1510 Pfam ABC transporter transmembrane region 331 597 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto13g3622 1510 ProSitePatterns ABC transporters family signature. 770 784 IPR017871 GO:0005524
Sto13g3622 1510 Gene3D - 1251 1500 IPR027417 -
Sto13g3622 1510 SUPERFAMILY ABC transporter transmembrane region 312 622 IPR036640 GO:0005524|GO:0016021
Sto13g3622 1510 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 89 1509 - -
Sto13g3622 1510 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 644 868 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3622 Sto-Chr13 38539990 38545522 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3622 663 857 Calmodulin-binding Proteins AT2G36910 32.227 4.80e-23 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3622 - K05666 gmx:100793361 2308.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3622 13 38539990 38545522 Sto13g3622 13 38539990 38545522 ECH