Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3606 ATGCCAAAAGTTTTAATTGGACAAAAACAAAACAGCCGCATAGCTAGGCACACGAAGAATGAGCTAGGGCAAGTCTCTCTTTTCCCCCCACCTCACCAATCCTCAGCTTCCGCTGTTCCTCGTTTCCAGAACCTTCTTGAAGCGGAAGCCTTTGACAGCAACCTTCCGTCTTCTTCGTCACACGCTGTGGATCATAATATGGTTGATGCCAACGCGGATCAGAAAGATTTCATTATCAGCCAAGATTTCATTCTCAGCCAAGATTTCTTTTGTACTCCAGATTATATAACCCCAGATAATCAGCATATTCTTAATGGCTTGGATTGTAACAAGAACTTCCTTCTCCCGACACAGGAGAATATTCCGTGCCCCAAATCACCGGAGAAGCTAAATACTACAAAAAGCAAGAGATGCCGACTGGATAGTATCTCCGGAAACCCTCTCAGTCCTACCTGGTCTGGTGGCCATCAAGCTGTGGAACTTGGAAATGACTCTGTTGCAGATGAAGTAGATATTGAGAAACTAATGGCAGCTGGTAAACCAAAGGGTCAAAATTATATCTCACATTCAGTGGTTGCCTTGCGCTCTAAGGCTATGCCCCCTCCTTGCATTAGGAACCCATATATGAAAGATACGTCAGAAAATGATACAGATCCCTATGGGAGCCGAAGAGCAAAATATACAGGTCTCTTCCCTGCAATTACTGGTGGTGATGGGCTTTCACGTTATTGCACCGACTTCCATGAGATTGAGcAAATTGGTAGAGGGAACTTTAGCAGCGTTTTCAAAGTATTAAAGAGAATTGATGGTTGCTTGTATGCTGTGAAACGCAGCACAAGACAGTTGACCCAGGAAACAGAAAGGAAAAAAGCTTTGATGGAAGTTCAAGCTTTGGCAGCCATAGGGTCCCATGAAAACATTGTGGGATACTACTCTTCATGGTTTGAAAATGATCAGCTGTACATTCAGATGGAGTTATGTGACCACAGCTTATCCATAAACAAGTCCACTACAGTGTTTACAGAAGGACAAGTGTTAGAAGCATTGCATCAGGTTGCAAATGCCTTGCGGTTTATACATGAGAGAGGAATTGCTCATCTTGATGTTAAACCTGATAATATCTATGTCAAAAATGGTGTTTATAAGCTTGGCGATTTTGGATGTGCAACCCTTCTTGATAACAGCCTGCCAATTGAAGAGGGCGATGCACGTTTTATGCCTCAGGAAATCCTGAATGAGAACTATGATCACCTTGACAAGGTTGATAttttctccttgggagcttCTATTTTTGAGCTCATTCGTGGATCACCTTTGCCAGAATCAGgatgtcaattttttaatcttaaagaGGGCAGGTTGCCACTCCTGCCCGGTCATTCAATGCAGTTTCAGAACTTGCTTAAGGTCATGATGGACCCTGATCCGGTTAAACGTCCTTCAGCAAGAGATTTATTGCAGAATCCAATCTTTGAGAGGAGCCTAAGAAGTCCAAAATATCAATGA 1506 0.4197 MPKVLIGQKQNSRIARHTKNELGQVSLFPPPHQSSASAVPRFQNLLEAEAFDSNLPSSSSHAVDHNMVDANADQKDFIISQDFILSQDFFCTPDYITPDNQHILNGLDCNKNFLLPTQENIPCPKSPEKLNTTKSKRCRLDSISGNPLSPTWSGGHQAVELGNDSVADEVDIEKLMAAGKPKGQNYISHSVVALRSKAMPPPCIRNPYMKDTSENDTDPYGSRRAKYTGLFPAITGGDGLSRYCTDFHEIEQIGRGNFSSVFKVLKRIDGCLYAVKRSTRQLTQETERKKALMEVQALAAIGSHENIVGYYSSWFENDQLYIQMELCDHSLSINKSTTVFTEGQVLEALHQVANALRFIHERGIAHLDVKPDNIYVKNGVYKLGDFGCATLLDNSLPIEEGDARFMPQEILNENYDHLDKVDIFSLGASIFELIRGSPLPESGCQFFNLKEGRLPLLPGHSMQFQNLLKVMMDPDPVKRPSARDLLQNPIFERSLRSPKYQ 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3606 501 Gene3D Transferase(Phosphotransferase) domain 1 326 496 - -
Sto13g3606 501 ProSiteProfiles Protein kinase domain profile. 247 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3606 501 PANTHER BNAA08G27310D PROTEIN 50 405 - -
Sto13g3606 501 PANTHER BNAA08G27310D PROTEIN 418 493 - -
Sto13g3606 501 Pfam Protein kinase domain 247 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3606 501 ProSitePatterns Protein kinases ATP-binding region signature. 253 276 IPR017441 GO:0005524
Sto13g3606 501 SMART serkin_6 247 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto13g3606 501 SUPERFAMILY Protein kinase-like (PK-like) 241 492 IPR011009 -
Sto13g3606 501 Gene3D Phosphorylase Kinase; domain 1 238 325 - -
Sto13g3606 501 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 50 405 - -
Sto13g3606 501 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 418 493 - -
Sto13g3606 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 364 376 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3606 Sto-Chr13 38449225 38453701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3606 8 493 Core Cell Cycle Gene Families AT1G02970 58.740 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Sto13g3606 Pkinase 4.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3606 K06632 - gmx:547742 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3606 13 38449225 38453701 Sto13g3606 13 38449225 38453701 ECH