Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3600 ATGATGGAGGTCTTGAAAGACGATTTTACGGAGCTAGAGATGGGGAACTCCGTGGAGTCGttacaaaattttttagttTCGCAACGGGAGCTTTTCCACAGTCAGATCGATCAGCTTGAGAAAATTGTCGTTACGCAATGCAAACTCACTGGCGTCAATCCTCTCTCTCAAGAAATGGCAGCTGGCGCTCTGTCAATAAAAATCGGAAAGAGACCCAGGGATTTATTAAATCCAAAAGCTGTAAATTACATGCAATTAGTTTTCTCCATTAAAGATGCAATTAGTAAGAAAGAATCTCGTGAGATCAGTGCTCTATTTGGCGTCACGGTGACACAGGTTCGCGAATTTTTCAATAGTCAACGCTCAAGAGTGAGAAGATTAGTTCGGTTGTCAAGGGAGAGGGTGTCAAGGTCTTCCTACTGTGAAGAACCTCGTGATGGGTTTCAAATACACTCTGATCCTATGATACCAATTAATCCAACTCCTTTAAACTCTTCTGGTCCTTCAAGTGTTGAAGAAGCATCTTGTTCAACACCAGAGGCTGCTTTGTCTGGCCTAAATGACTTGGATAAGCATTttgttgataatatttttagtttaatgCGGAAGGAGGAAACATTTTCGGGGCAGGAAAAATTGATGGAGTGGATATTGAAGATACATAACTTTTCAGTATTATGTTGGTTTTTAACTGGTGGAGGTGTGATGATTTTAGGAGCTTGGTTGAATGAAGCAGCAGTTGAAGAGCAAACAAGtgttcttcttcttattttaaAGGTCCTTTGTCATTTGCCTCTACATAAGGCCCTTCCCACACACATATCAGCTGTACTGCAGTGTGTTAATAGACTCCGGTTCCACAGGACATCAGACAGCATCCATTTTCACTGTATTATTGTTGACCTAATGCAACTTGTGATTATTAATCTCTCTGATTTGAAGATCAGACATATCAAACAGGGCAAGGGTTTTGTTATCAAAGTGGATATCGGTCAAATTATGGGCACCGAATCATGGAATTCAAATATTGATGTTCCTGAAGATGTTCTGGCGCTCTCAAATGAAGGTTCAGATAATTTCAGgAAATTGGAAGCTCCCCAAACTGTGAAATTGTTGACAGCCTCTTCGGATGATTCTACTAAGAAGGCTGTCCTAGGTGTATCTTCATCTCGTATCCTTGGAGAAACTAGGGAGCGCAGAAAAGTGCAGTTAGTGGAGCAGCCAGGCCAAAAGACAGTGAGCAGAAGCCCACAAGCTGCAAGAGTAGGACCTGCAAGTCAAAGTCGTCCAATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGCGCTTTATTTATGCAGAGCAAGTATGGGAAACCTGGTTCATCAAAAGGAAGTAAAGAAGCAAAGATTGATAGTTTGAATAAACCTCAGACAAACCAGGCTGGTGTTGTGGCATCTTTATCTAAATATCCTGTTTCACCCAAAACTGAGGAAGACTTGAAACCTCCACTGCTTCCCTCTAAAATTTTGAATAGGAAGGAAGCTTCTGATTCAAAATCAAGAATGGATTTGAAGGAGCCTTTCTGGGAGAAGTGCAAGCGGGTGCAAATCCAATGGAAGAAACCAGCAGAAGTGAAACTTAACGATACCTGGAGTGTTGGTGCTGGTGAAAATAGTAAAGAGGTTGATGTCCAGAAAAACAGAAACCGGCGGGAGAAGGAGACTCTATATCAGACTGCCCAGGATATACCATTTAATCCCAAGGAGCCATGGGACCTGGAGATGGACTATGATGACTCTTTGACCCCTGCAATTCCCATTGAACAGCTTCCTGATGGTGATGGTGCAGAAACACCAGCTGCCCCCAATCAAAATGTTCAAGTGGGGACCACCTCATCATCTTCAAATATTGCTGAACCTGATCTAGAGCTGCTTGCTGTACTGCTAAAAAATCCAGAGTTGGTATTTGCCTTGACTTCTGGACAAGCTGGTAGCATACCAACTGAGGAAACGGTGAAGCTGCTTGACATGATCAAAAGAGGCAGCGTCCATTTGGGTGGAAGTGCGCAGGAGAAGGTGGAAGTATCTCTCCCTTCTCCGACTCCTTCTAGCGATCCAAGAACGGTGCGTGATTTGAGACTTGATATTGCAACTATTTGTCAAAGGTCTTGTCAATATCCTAGTACAGTGCCACCAGCACTCCACTTCAGCCTTGTCGGCTTGTACCTATTCCTTTTGAGAGTGAATAGCACCTCTAGCATTGGGAGTGGATGGACAACCGAACTTGCAAAGAATCCCTTTTCTCGGCAAAATCATGATCAAATCCAGAACCTTCCAGTTGCTGCAACCACCAATGTGTCATTGTCTCAGGTTCCACCCACTGGTATAGCAGTACGGCAACATCAAACTGATTCACTGTCTCAAGCAACTAATATTGTTCCTACTCTTTCCTCCATTCATCCAACAACACAAATGTCTTCGTCAAATATAGGTTTAAGTACCATGATGAACACCATAATCACTGCAAATGCATCTTCTGCACGTTCACCTTTAGCAATGCAGGTAGATGGCAGCAGTAATGTAAAACCAATAGCTAATTTGAGTATACAAGAGGGATTGTCTAATTCATATTCGCAATCCTTTGTGTTGCCATCACCAACACCTACACCATCACTTTCAGTCACACCCCCACAAAGAAATATGCATTCAATTCGGCAGTCCCAGCAGACACATTTTTCTGAACCTTCTTCCTATCACGAGCCTGCACATTCCTACCTTCCTCCTATAGAGAAACCAGGTCATCATGTATCAGAATCATGGAGAGTAAGGCAGGATATGTCTTCTCGTTATCATTCTCAACTAAACCAACACAACTATAACGCATTTGTTGAAGGAGGATCCAGTCGATCTGGTTCTTCTTGGGAGAGAAGTGATTTTGGGGGAGGAGAAGAATTTGAATCATGGAGTCCAGATAATAGTCCAAGTAGAAATAATAGGTATAATGGGGGAAGAAATTACCCTGATTCCAGAATGAATCATGGGAGGAATTATAGGCCTGAATGGTCAAGACAACGGGGTTCTTCTGTGAACTGGGATCCTAGTAGACAAGGGAGCAGAAAGTGGCATGATCAGAGACGTTGA 3123 0.4233 MMEVLKDDFTELEMGNSVESLQNFLVSQRELFHSQIDQLEKIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQLVFSIKDAISKKESREISALFGVTVTQVREFFNSQRSRVRRLVRLSRERVSRSSYCEEPRDGFQIHSDPMIPINPTPLNSSGPSSVEEASCSTPEAALSGLNDLDKHFVDNIFSLMRKEETFSGQEKLMEWILKIHNFSVLCWFLTGGGVMILGAWLNEAAVEEQTSVLLLILKVLCHLPLHKALPTHISAVLQCVNRLRFHRTSDSIHFHCIIVDLMQLVIINLSDLKIRHIKQGKGFVIKVDIGQIMGTESWNSNIDVPEDVLALSNEGSDNFRKLEAPQTVKLLTASSDDSTKKAVLGVSSSRILGETRERRKVQLVEQPGQKTVSRSPQAARVGPASQSRPMSADDIQKAKMRALFMQSKYGKPGSSKGSKEAKIDSLNKPQTNQAGVVASLSKYPVSPKTEEDLKPPLLPSKILNRKEASDSKSRMDLKEPFWEKCKRVQIQWKKPAEVKLNDTWSVGAGENSKEVDVQKNRNRREKETLYQTAQDIPFNPKEPWDLEMDYDDSLTPAIPIEQLPDGDGAETPAAPNQNVQVGTTSSSSNIAEPDLELLAVLLKNPELVFALTSGQAGSIPTEETVKLLDMIKRGSVHLGGSAQEKVEVSLPSPTPSSDPRTVRDLRLDIATICQRSCQYPSTVPPALHFSLVGLYLFLLRVNSTSSIGSGWTTELAKNPFSRQNHDQIQNLPVAATTNVSLSQVPPTGIAVRQHQTDSLSQATNIVPTLSSIHPTTQMSSSNIGLSTMMNTIITANASSARSPLAMQVDGSSNVKPIANLSIQEGLSNSYSQSFVLPSPTPTPSLSVTPPQRNMHSIRQSQQTHFSEPSSYHEPAHSYLPPIEKPGHHVSESWRVRQDMSSRYHSQLNQHNYNAFVEGGSSRSGSSWERSDFGGGEEFESWSPDNSPSRNNRYNGGRNYPDSRMNHGRNYRPEWSRQRGSSVNWDPSRQGSRKWHDQRR 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3600 1040 SMART HOX_1 69 131 IPR001356 GO:0003677
Sto13g3600 1040 ProSiteProfiles 'Homeobox' domain profile. 67 127 IPR001356 GO:0003677
Sto13g3600 1040 MobiDBLite consensus disorder prediction 956 1040 - -
Sto13g3600 1040 MobiDBLite consensus disorder prediction 877 911 - -
Sto13g3600 1040 MobiDBLite consensus disorder prediction 877 926 - -
Sto13g3600 1040 MobiDBLite consensus disorder prediction 1015 1029 - -
Sto13g3600 1040 MobiDBLite consensus disorder prediction 614 629 - -
Sto13g3600 1040 SUPERFAMILY Homeodomain-like 70 132 IPR009057 -
Sto13g3600 1040 PANTHER HOMEOBOX PROTEIN LUMINIDEPENDENS 2 703 - -
Sto13g3600 1040 PANTHER HOMEOBOX PROTEIN LUMINIDEPENDENS 745 1040 - -
Sto13g3600 1040 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 745 1040 - -
Sto13g3600 1040 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 2 703 - -
Sto13g3600 1040 MobiDBLite consensus disorder prediction 407 433 - -
Sto13g3600 1040 MobiDBLite consensus disorder prediction 449 513 - -
Sto13g3600 1040 MobiDBLite consensus disorder prediction 683 702 - -
Sto13g3600 1040 MobiDBLite consensus disorder prediction 403 434 - -
Sto13g3600 1040 MobiDBLite consensus disorder prediction 598 629 - -
Sto13g3600 1040 MobiDBLite consensus disorder prediction 465 480 - -
Sto13g3600 1040 MobiDBLite consensus disorder prediction 982 999 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3600 Sto-Chr13 38408273 38415832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3600 486 766 Homeobox Transcription Factor Family AT4G02560 41.667 1.03e-43 170