Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3597 ATGCTGAAGGAAGGCATCGCAAGAAGTGAATCTAGGAAATCTGCCGTTTTTGCTATCTTATCCACTGCCTCAAATACACTACCATGTTCACGAAAGCATTCCACAGTCCCAGGCTTCTTGCCTACCTTCCTCAAACTCAATCCAAGATCAGTCTCCTCCAAAGTCGAAGCCAATCAATCCAATTTCACTATCTCTTACCTCATCGACTCTTGTGGATTGGCTCCCGAAGCTGCCTCTCTAGCTTCCCAAAAGCTTCAACTTCATTCCGCAGAAAGACCCGACTCTGTCCTCACTCTTCTCAGAGATTATGGCTTCTCAAACTCCCAGATTTCAAATGTCGTCAGGAAGCGCCCATTGCTCCTCTTAGCTAACCCTAACGACACCCTTTTGCCCAAGCTCCAATTTTTCCACTCCATCGGCATTTCCAGTTCTGCCCTCGCTCGAATTCTGGCTGCAGACCCAACCATTTTGACGAGAAGCTTGGAGAAGCAGATCATACCTTGCTACAATTTCCTCAAAAGTGTTCTTCTCTCAGACGAGAAGGTCGTCGCTGCCTTGAAGCGCACCTCCTGGGTTTTCCTCGAAGACCATTCCAAGAAACTCATACCCAATCTCTCTCTTCTGAGATCAATTGGCGTTCCGGATTCGTGCATTTCATTGTTGCTCGCTCATTTCCCCGAAGCATTGATTCAAAAGAATGAACACTTCACGAAGATCGTGGAAGAGATCAAGGAAATGGGATTCGACCCAACCAAGTCCACATTCGTGTTAGCAATTCACGTAATCGCGGGTAATAAATCGATATACAATCGGTGCTTCGAGGTATACCAGAGGTGGGGTTGGTCTGAGGATGAGATAGTGATGGCATTCAGGAAGCATCCAAACTGTATGCTTTTATCAGAAAACAAGTTAAACAAAGGGATGGATTTCTTTGTGAACAAGATGGGATGGCCTTCGAGGATGATAGCGAAATGCCCAGTGGTGCTATTTTTCAGCTTGGAGAAGAGGATAAAGCCAAGGTGTTCGGTGGTGCAGGTATTGAGGATGAAGGGATTGATTAAGAAAACTCTGAGTTTGTCCACTGTGCTTTTGCCGGAGGAGAAGCGTTTCTTGGACAAGTTTGTGGTCAAGTATGAGCACCAAGTGCCTCAATTGTGGAGTGTGTATCAGATGAAACTGGATTTTAACACCCTCCTTTGA 1200 0.4592 MLKEGIARSESRKSAVFAILSTASNTLPCSRKHSTVPGFLPTFLKLNPRSVSSKVEANQSNFTISYLIDSCGLAPEAASLASQKLQLHSAERPDSVLTLLRDYGFSNSQISNVVRKRPLLLLANPNDTLLPKLQFFHSIGISSSALARILAADPTILTRSLEKQIIPCYNFLKSVLLSDEKVVAALKRTSWVFLEDHSKKLIPNLSLLRSIGVPDSCISLLLAHFPEALIQKNEHFTKIVEEIKEMGFDPTKSTFVLAIHVIAGNKSIYNRCFEVYQRWGWSEDEIVMAFRKHPNCMLLSENKLNKGMDFFVNKMGWPSRMIAKCPVVLFFSLEKRIKPRCSVVQVLRMKGLIKKTLSLSTVLLPEEKRFLDKFVVKYEHQVPQLWSVYQMKLDFNTLL 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3597 399 Gene3D Transcription termination factor 3, mitochondrial 70 163 IPR038538 -
Sto13g3597 399 Gene3D Transcription termination factor 3, mitochondrial 164 383 IPR038538 -
Sto13g3597 399 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 43 392 - -
Sto13g3597 399 Pfam mTERF 97 250 IPR003690 GO:0003690|GO:0006355
Sto13g3597 399 Pfam mTERF 221 371 IPR003690 GO:0003690|GO:0006355
Sto13g3597 399 SMART mt_12 287 318 IPR003690 GO:0003690|GO:0006355
Sto13g3597 399 SMART mt_12 147 178 IPR003690 GO:0003690|GO:0006355
Sto13g3597 399 SMART mt_12 183 214 IPR003690 GO:0003690|GO:0006355
Sto13g3597 399 SMART mt_12 41 74 IPR003690 GO:0003690|GO:0006355
Sto13g3597 399 SMART mt_12 111 142 IPR003690 GO:0003690|GO:0006355
Sto13g3597 399 SMART mt_12 319 353 IPR003690 GO:0003690|GO:0006355
Sto13g3597 399 SMART mt_12 219 249 IPR003690 GO:0003690|GO:0006355
Sto13g3597 399 PANTHER CGI-12 PROTEIN-RELATED 43 392 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3597 Sto-Chr13 38382598 38383871 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sto13g3597 mTERF 4.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3597 K15032 - qsu:112019279 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3597 13 38382598 38383871 Sto13g3597 13 38382598 38383871 ECH