Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3573 ATGGGCTCCAAGCCGTGGCTGTACCCAGCTCCGACCTATCGAACTCTCGAGACCTACTGGGATACCGATGAAGACGCTCCTGGCCCACGAACAGGTCACACACTCACCGCCGTTGCCGCCACCAAGTCACACGGTCCCCGCCTTATCCTATTCGGGGGCGCCACCGCTATTGAAGGAGGCTCTTCCTCTACTCCCGGCATTCGATTAGCGGGAGTCACCAATTCTGTTCATTCCTACGACGTTCTTACAAGAAAATGGACCAGAATAAGACCTGCTGGAGAGCCGCCCTCTCCTCGGGCTGCCCATGCCGCTGCCGCTGTTGGAACTATGGTTGTTTTCCAGGGTGGGATAGGTCCCGCTGGGCATTCCACTGATGACCTCTATGTGCTTGACTTGACCAATGATAAATTCAAGTGGCACAGAGTCGTTGTGCAAGGGCAAGGACCTGGGCCTCGCTATGGCCATGTGATGGACTTGGTTGCTCAGAGATATCTTGTTACTGTCAGTGGGAATGACGGGAAAAGAGTTCTTTCCGATGCTTGGGTTTTGGATACTGCTCAAAAACCTTACGTGTGGCAGAGGTTAAACCCAGAAGGTGATAGGCCTTCTGCTAGAATGTATGCGACTGCCAGTGCCCGCTCAGATGGCATGTTTTTGCTGTGTGGTGGAAGAGATTCTTCTGGAGCACCGCTAGGAGATGCCTATGGACTGCTCATGCATAGGAATGGTCAATGGGAATGGACCCTTGCACCTGGAGTTTCTCCTTCACCAAGGTATCAACATGCTGCGGTTTTCGTAGGTGCAAGATTGCATGTTACGGGAGGTGTTGTCAAGGGAGGACGTGCAGTAGAAGGTGAAGCAGCCATTGCAGTATTGGATACTGCTGCTGGGGTTTGGTTGGACAGAAATGGCCTTGTGACCTCACGCACAAGTAAAGGTCATGACTATGACCCTGCTTTGGAGCTTATGCGTCGTTGTCGCCATGCAGCAGCTGCTGTGGGTGttcgtatatatatttatggtgGTCTCAGAGGAGATATTCTATTAGATGATTTCCTAGTGGCTGAAAATTCACCACATCACTCTGAAATTGACTCTCCTGTTTTAACTTCTGAGAGAGCTTCACCTATTACAAGCCCCAAAAGGAATCAATCTAACTTAAATTATAATGTGACAACACCAAGTTTGGATGGCGGACTAGACATGGTCTCATCTGGTGGCATGAGCATGGATAAAAACTCCATGGAGAAACTGAGGGAAGCTTCTGCTGCTGAGGCTGAGGCAGCGAGTGCTGTCTGGCAAGCTGTGCAGGCTGTATCAACCAGTCAAGCTGAAGAAACATCTGTATCAGAGGATAACTCAAAAGCAGCAGAAATAGCTTCCGATGGCAGTGACACAGAGGGAGATGTTCGCCTGCATCCCAGAGCTGTTGTAGTTGCTAAAGAGGCTGTAGGTAACCTGGGTGGAATGGTGAGACAGTTATCGTTGGATCAATTTGAAAATGAGAGCAGGCGTATGGTTCCTACAAATAATGATTTGCCATATCCTATGAAAAAGTTCACCAGGCAGAAATCACCTCAGGGTTTACATAAAAAGTGCCAGATAATTTCAACTTTGCTTAGGCCTCGCAACTGGAAAGCTCCTGCAAATAGGCGGTTCTTCTTGGATTCTTATGAAGTGGGCGAGCTGTGTTATGCTGCTGAACAGATATTTATGCATGAACCAACTGTTCTACAGCTGAAAGCTCCTGTCAAAGTATTTGGTGATCTTCATGGACAGTTTGGTGATTTGATGCGGCTATTTGATGAATATGGATTTCCTTCAACTGCAGGAGACATAACGTACATCGACTACCTCTTTTTGGGAGATTATGTTGATCGAGGACAGCACAGCTTGGAAACCATCACCTTGCTACTTGCTCTCAAGATTGAGTATCCTGAGAATGTTCACTTGATACGTGGAAACCATGAAGCAGCAGATATCAATGCGCTATTTGGTTTTCGCATTGAGTGCATTGAGAGAATGGGAGAAAATGATGGAATATGGGCATGGACGCGGTTCAATCAACTTTTTAACTATCTCCCACTTGCTGCTcttattgaaaagaaaattatctgCATGCATGGTGGCATAGGAAGGTCTATCCATTCAGTAGAACAGATAGAGAAGCTTGAAAGGCCCATAACAATGGATGCAGGATCTATTATTTTAATGGACCTCCTATGGTCTGATCCGACAGAGAATGATAGTGTAGAGGGTTTGAGACCAAATGCCAGAGGGCCGGGACTTGTCACATTTGGGCCTGATCGTGTCACAGAATTCTGCAAGAAAAATAAACTACAGCTGATTATAAGAGCCCATGAGTGTGTGATGGATGGTTTTGAGCGATTTGCCCAGGGGCAATTAATAACTCTTTTTTCTGCAACTAACTATTGCGGGACGGCGAACAATGCTGGAGCCATATTGGTAGTTGGAAGGGGTTTGGTTGTGGTTCCAAAGTTAATTCATCCCTTACCACCTCCCCTTCAGTCTCCTGAGACATCTCCTGAGCGTGTCATGGATGAGACATGGATGCAGGAGCTTAATATTCAGAGGCCACCAACTCCTACTCGGGGTCGACCACAGCCTGACCATGACCGCAGCTCCCTAGCATACATATGA 2661 0.4705 MGSKPWLYPAPTYRTLETYWDTDEDAPGPRTGHTLTAVAATKSHGPRLILFGGATAIEGGSSSTPGIRLAGVTNSVHSYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKRVLSDAWVLDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGAPLGDAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVVKGGRAVEGEAAIAVLDTAAGVWLDRNGLVTSRTSKGHDYDPALELMRRCRHAAAAVGVRIYIYGGLRGDILLDDFLVAENSPHHSEIDSPVLTSERASPITSPKRNQSNLNYNVTTPSLDGGLDMVSSGGMSMDKNSMEKLREASAAEAEAASAVWQAVQAVSTSQAEETSVSEDNSKAAEIASDGSDTEGDVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMVPTNNDLPYPMKKFTRQKSPQGLHKKCQIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPPLQSPETSPERVMDETWMQELNIQRPPTPTRGRPQPDHDRSSLAYI 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3573 886 PRINTS Serine/threonine phosphatase family signature 583 610 IPR006186 GO:0016787
Sto13g3573 886 PRINTS Serine/threonine phosphatase family signature 618 645 IPR006186 GO:0016787
Sto13g3573 886 PRINTS Serine/threonine phosphatase family signature 651 675 IPR006186 GO:0016787
Sto13g3573 886 PRINTS Serine/threonine phosphatase family signature 689 715 IPR006186 GO:0016787
Sto13g3573 886 PRINTS Serine/threonine phosphatase family signature 719 746 IPR006186 GO:0016787
Sto13g3573 886 PRINTS Serine/threonine phosphatase family signature 779 799 IPR006186 GO:0016787
Sto13g3573 886 PRINTS Serine/threonine phosphatase family signature 801 817 IPR006186 GO:0016787
Sto13g3573 886 Gene3D - 10 193 IPR015915 GO:0005515
Sto13g3573 886 CDD MPP_Bsu1_C 535 837 IPR041758 -
Sto13g3573 886 PIRSF STPPP_BSU1 1 886 IPR012391 GO:0004721|GO:0009742
Sto13g3573 886 MobiDBLite consensus disorder prediction 360 410 - -
Sto13g3573 886 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 886 - -
Sto13g3573 886 SMART pp2a_7 555 841 IPR006186 GO:0016787
Sto13g3573 886 MobiDBLite consensus disorder prediction 363 399 - -
Sto13g3573 886 Pfam Calcineurin-like phosphoesterase 583 790 IPR004843 GO:0016787
Sto13g3573 886 Pfam Kelch motif 96 133 - -
Sto13g3573 886 SUPERFAMILY Metallo-dependent phosphatases 534 847 IPR029052 -
Sto13g3573 886 Gene3D - 194 363 IPR015915 GO:0005515
Sto13g3573 886 MobiDBLite consensus disorder prediction 443 460 - -
Sto13g3573 886 Gene3D - 518 857 IPR029052 -
Sto13g3573 886 ProSitePatterns Serine/threonine specific protein phosphatases signature. 652 657 IPR006186 GO:0016787
Sto13g3573 886 Pfam Serine-threonine protein phosphatase N-terminal domain 534 581 IPR031675 -
Sto13g3573 886 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 886 - -
Sto13g3573 886 MobiDBLite consensus disorder prediction 443 469 - -
Sto13g3573 886 MobiDBLite consensus disorder prediction 862 886 - -
Sto13g3573 886 SUPERFAMILY Kelch motif 73 356 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3573 Sto-Chr13 38262446 38268650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3573 584 782 Calmodulin-binding Proteins AT5G63870 32.609 2.12e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3573 K01090 - gmx:100805538 1621.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3573 13 38262446 38268650 Sto13g3573 13 38262446 38268650 ECH