Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3570 ATGGCTGGTAGTAATGAAGTCAACCTTAGCGAATCCAAGAGTGTGGTTCCTCTCAATACTTGGGTTCTTATCTCCAATTTCAAGCTAGCCTACAATCTACTGAGACGTGCGGATGGAACCTTCAATCGTGAGTTAGCAGAGTTTCTGGACAGGAAGGTCCCTGCCAATACAATTCCCGTGGATGGCGTATTCTCCTTCGACCATGTGGATCGAAACACGGGGCTTTTCAATCGTGTGTATCAACCAGCTCCAGAAAATGAGTCTCAATGGGGCATTATAGAGCTTGAGAGGCCCCTGAGCACCACCAACATCGTCCCTGTCATAATCTTCTTCCATGGTGGAAGCTTCTCCCATTCCTCTGCTAACAGTGCTATCTACGACACCTTCTGCCGCCGTCTTGTCAACATTTGCAAGGCCGTCGTGGTCTCTGTGAACTACCGCCGATCCCCAGAACATCGCTATCCATGTGCTTATGAAGATGGCTGGGCTGCACTTAAGTGGGTTAAATCAAGGCCATGGCTTCAGAGTGGGAAGGATAAGAAGGTACATGTATACCTTGCCGGAGACAGTTCCGGCGGTAACATTGTTCACCACGTGGCGGCAACGGCGGCAGAGGAAGATATAGAGGTATTGGGTAATATCTTGCTTCATCCATTGTTTGGAGGGGAGAAGAGAACAGAGTCGGAGAAGAGATTGGATGGGAAGTACTTTGTGAAATTGCAAGACCGTGATTGGTATTGGAGGGCTTTTCTGCCTGAAGGGGAAGATAGAGATCATCCAGCATGTAACCCATTTGGCCCTAGAGGGAAAAGCCTTGTGGGACTCAACTTCCCTAAGACTCTTGTTTGTGTGGCTGGTTTGGATCTTCTACAAGATTGGCAATTAGCATATGTGGAAGGTCTCAAGAATTGTGGACAAGAGGTTAAGCTCCTTTTCCTTAAGGAGGCCACAATTGGTTTCTACTTCTTGCCAAACAATGATCATTTCTATTGTCTTATGGAGGAGATAAACAGCTTCGTTAATTCTAACTGTTAA 1035 0.4686 MAGSNEVNLSESKSVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPANTIPVDGVFSFDHVDRNTGLFNRVYQPAPENESQWGIIELERPLSTTNIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVNICKAVVVSVNYRRSPEHRYPCAYEDGWAALKWVKSRPWLQSGKDKKVHVYLAGDSSGGNIVHHVAATAAEEDIEVLGNILLHPLFGGEKRTESEKRLDGKYFVKLQDRDWYWRAFLPEGEDRDHPACNPFGPRGKSLVGLNFPKTLVCVAGLDLLQDWQLAYVEGLKNCGQEVKLLFLKEATIGFYFLPNNDHFYCLMEEINSFVNSNC 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3570 344 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Sto13g3570 344 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
Sto13g3570 344 PANTHER ARYLACETAMIDE DEACETYLASE 2 341 - -
Sto13g3570 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Sto13g3570 344 PANTHER GIBBERELLIN RECEPTOR GID1B 2 341 - -
Sto13g3570 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Sto13g3570 344 SUPERFAMILY alpha/beta-Hydrolases 73 341 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3570 Sto-Chr13 38245355 38246856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3570 1 342 Carbohydrate Esterase AT3G63010 76.968 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3570 K14493 - qsu:112001486 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1174 8 7437053 7439991 Sto13g3570 13 38245355 38246856 CCT
Sto13g3570 13 38245355 38246856 Sto13g3570 13 38245355 38246856 ECH
Sto8g0548 8 3378106 3379732 Sto13g3570 13 38245355 38246856 ECH