Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3486 ATGTCCCGTCATGGCCCGTCCCTCCTGGATATCTCTGCTTCCCTCACCCAATTCACTGCCAAAAAAAGGTGGCGTTTTGCTTATACAGCCATTTATTCTAGAAGGGTCATGCTTTCCCTTGCCACTGAGGTGatatcaaaaagaaaaactcTTCAAGTTCAACACGTGAACAGCAATGAAATTACAAGTCAGCACCCTTTTGTCTTTTCTCTTGATCAACCTCGACTCACAGAAATGGTGAAGGACAAAGACTTGGAAGCTCTTGCTGCTCTTGGAGGAGTGGAAGGCATTGCCTTTGCTCTTGGTACTAATCCTGCCAAGGGAATCCATGGCAGCCATGAAGATATTGGCAGGCGGTGTGagttttttggttcaaacacaTATCAGAGGCCATCACCAAAAGGTCTCTTACACTTCGTTCTGGAATCTCTCAATGACACAACCATTCTCATCCTTCTACTTTGTGCTGGCCTTTCTCTTGGTTTTGGCATCAAAGAAGATGGAGCAGAGGAAGGGTGGTATGAAGGTGGGAGTATATTCATAGCAGTCTTTTTGGTGGTGCTTGTCTCTGCACTTAGCAACTTCCGACAAGAAAGGCAATTTGAAAAATTGTCTAACATAAGTAACAACATCAAAGTTGATGTTGTACGAAATGGAAGGCCCCAACACATATCCATCTTTGACATTCTTGTGGGAGATGTTGTATCCCTCAAGATTGGAGACCAAGTTCCTGCTGATGGATTATTCTTAAATGGCCATTCTTTGTATGTGGATGAATCAAGCATGACAGGTGAGAGTGAGCATGTTGAAGTTGAAACTCTAGAAAACCCATTCCTCTTCTCCGGTTCAAAGGTAGTGAATGGCTATGCTCAAATGCTTGTAACCTCTGTGGGAACCAACACGGCTTGGGGTGAGATGATGAGCTCCATATCTCGCAACACCAACGAGAGAACTCCATTACAAGCTCGCCTTGATAAGTTAACATCTTCTATTGGAAAAGTAGGTCTTGTAGTCGCTTTTCTTGTTCTTCTAGTGTTGTTAATCCGTTATTTCACTGGGAATACACATGATGAGAATGGGAACAAGGAGTTCAATGGGAGTAAAACTGATATAAATGATGTGTTCAATGAAGTTGTGCACATCATTTCAGCTGCAGTCACTATTGTGGTTGTGGCAATCCCTGAAGGTCTTCCGTTAGCTGTTACTCTCGCACTAGCTTACTCCATGAAGAGAATGATGGCTGACCAGGCAATGGTGAGGAAGCTTTCTGCTTGTGAGACCATGGGTTCAGCAACAGTCATCTGTACTGATAAAACTGGGACTTTGACGTTGAATCAAATGAGAGTGACAAAGTTTTGGGTTGGCCAAGAAAACATTAAGGAAAATTCTTCACAAGCAATGGCTCTGAATGTTCTAGACTTATTTCATCAGGGAGTTGGCCTAAATACAACAGGTAGTGTCTACAAGCCTTCTTCAGAATCTGAACCTGAAATTTCTGGTACTCCAACAGAGAAAGCAATCCTTTTATGGGCTATATCAGATTTAGGTATGGACATGGATGAGTTGAAGCTGAATTATAAAATTCTCCATGTTGAAACATTTAACTCAGAGAAGAAACGAAGTGGCGTTGCAATAAGGAAGGAGAATGACTGCACCATTCATGTGCATTGGAAAGGTGCTGCTGAGATGGTACTTGGAATGTGTTCCAAGTATATTGATAGTAATGGGACAACCAAGTCCCTTGATGAAGATAGGAGTGAAATTGAGAAGATAATTCAAGGAATGGCAGCTAGTAGCCTGCGATGTATTGCATTTGCTCACATCCAAATTTCAGAAGAAATTGACTACAACAATAAGGAGAAAACAAATCCAATTCTAAGAGAAGATGGCTTGACCTTGTTAGGAATTGTAGGTCTCAAGGATCCATGTCGACCGGATGTGAAGACCGCGGTCGAAACGTGCAAATCTGCAGGAGTGGATATCAAAATGATCACTGGAGATAACGTATTCACGGCGAAAGCAATAGCAACAGAATGTGGAATACTAGAACTTGGTAACCAAATAAGTCTAGGAGAGGTGGTAGAAGGCGTGGAATTCCGAAGCTACacagaagaagaaagaatgCATAGAGTAGAGAAAATCCGTGTGATGGCAAGATCATCCCCTTTGGACAAACATTTGATGGTACAATGCTTAAAGAAGAAAGGCCACGTAGTTGCTGTCACTGGAGATGGCACAAATGATGCACCTGCCTTAAAAGAAGCTGATATTGGACTCTCTATGGGCATCCAAGGCACAGAGGTAGCCAAGGAAAGCTCTGACATTGTCATATTGGATGATAACTTCAGTTCTGTGGCCACAGTTTTAAGGTGGGGACGATGTGTTTATAACAACATCCAGAAATTCATACAGTTTCAACTCACTGTGAATGTAGCAGCACTAGTTATAAATTTTATTGCAGCAGTTTCAGCTGGAGAAGTTCCCTTAACAGCAGTGCAACTGTTATGGGTAAATCTGATTATGGACACACTAGGTGCTCTGGCTTTGGCTACAGAACGCCCTTCTAATGACTTAATGCAGAAAAGGCCAGTGGGTAGAACGGAACCTCTTATTTCCAACATCATGTGGAGGAACCTCTTATCTCAAGCTTTGTATCAGATAGTTGTGCTCTTGGTTTTACAATTCAAAGGCAAGTCAATCTTCAATGTAAGTAAAGAGGTAAAAGATACTGTTATTTTTAATACTTTTGTTCTCTGCCAAGTTTTCAATGAGTTCAATTCAAGGAGTATGGAGAAACACAATGTGTTCAAAGGCATTCACAAGAACCACTTATTTCTTGGAATTGTGGGAATAACTATTGTTCTACAAGTTGTGATGGTGGAATTCCTCAAGAAGTTCGCAGACACAGTGAGCTTAACATGGCAGCAATGGGGAGCTTGTGTTATTATCGCAGCCGTGTCGTGGCCAATCGGTTGGATATCTTGGTACAAGACTTGTGGAAATCCAGGATCCACTACAAGTTTGAAACATAGTGGATCTTGA 3042 0.4135 MSRHGPSLLDISASLTQFTAKKRWRFAYTAIYSRRVMLSLATEVISKRKTLQVQHVNSNEITSQHPFVFSLDQPRLTEMVKDKDLEALAALGGVEGIAFALGTNPAKGIHGSHEDIGRRCEFFGSNTYQRPSPKGLLHFVLESLNDTTILILLLCAGLSLGFGIKEDGAEEGWYEGGSIFIAVFLVVLVSALSNFRQERQFEKLSNISNNIKVDVVRNGRPQHISIFDILVGDVVSLKIGDQVPADGLFLNGHSLYVDESSMTGESEHVEVETLENPFLFSGSKVVNGYAQMLVTSVGTNTAWGEMMSSISRNTNERTPLQARLDKLTSSIGKVGLVVAFLVLLVLLIRYFTGNTHDENGNKEFNGSKTDINDVFNEVVHIISAAVTIVVVAIPEGLPLAVTLALAYSMKRMMADQAMVRKLSACETMGSATVICTDKTGTLTLNQMRVTKFWVGQENIKENSSQAMALNVLDLFHQGVGLNTTGSVYKPSSESEPEISGTPTEKAILLWAISDLGMDMDELKLNYKILHVETFNSEKKRSGVAIRKENDCTIHVHWKGAAEMVLGMCSKYIDSNGTTKSLDEDRSEIEKIIQGMAASSLRCIAFAHIQISEEIDYNNKEKTNPILREDGLTLLGIVGLKDPCRPDVKTAVETCKSAGVDIKMITGDNVFTAKAIATECGILELGNQISLGEVVEGVEFRSYTEEERMHRVEKIRVMARSSPLDKHLMVQCLKKKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFSSVATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFIAAVSAGEVPLTAVQLLWVNLIMDTLGALALATERPSNDLMQKRPVGRTEPLISNIMWRNLLSQALYQIVVLLVLQFKGKSIFNVSKEVKDTVIFNTFVLCQVFNEFNSRSMEKHNVFKGIHKNHLFLGIVGITIVLQVVMVEFLKKFADTVSLTWQQWGACVIIAAVSWPIGWISWYKTCGNPGSTTSLKHSGS 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3486 1013 Pfam haloacid dehalogenase-like hydrolase 433 756 - -
Sto13g3486 1013 SFLD C1.7: P-type atpase like 417 795 - -
Sto13g3486 1013 Pfam Cation transporting ATPase, C-terminus 827 993 IPR006068 -
Sto13g3486 1013 Pfam E1-E2 ATPase 211 413 - -
Sto13g3486 1013 Pfam Cation transporter/ATPase, N-terminus 91 159 IPR004014 -
Sto13g3486 1013 CDD P-type_ATPase_Ca_PMCA-like 118 875 - -
Sto13g3486 1013 SMART Cation_ATPase_N_a_2 87 164 IPR004014 -
Sto13g3486 1013 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 179 352 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto13g3486 1013 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 376 466 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto13g3486 1013 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 712 823 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto13g3486 1013 Gene3D - 112 311 - -
Sto13g3486 1013 SUPERFAMILY Calcium ATPase, transduction domain A 210 309 IPR008250 -
Sto13g3486 1013 SUPERFAMILY HAD-like 433 847 IPR036412 -
Sto13g3486 1013 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 83 992 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Sto13g3486 1013 Gene3D - 445 642 IPR023299 GO:0000166
Sto13g3486 1013 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 442 639 IPR023299 GO:0000166
Sto13g3486 1013 ProSitePatterns E1-E2 ATPases phosphorylation site. 437 443 IPR018303 -
Sto13g3486 1013 SFLD p-type atpase 417 795 IPR044492 -
Sto13g3486 1013 SUPERFAMILY Calcium ATPase, transmembrane domain M 91 994 IPR023298 -
Sto13g3486 1013 PRINTS P-type cation-transporting ATPase superfamily signature 258 272 - -
Sto13g3486 1013 PRINTS P-type cation-transporting ATPase superfamily signature 435 449 - -
Sto13g3486 1013 PRINTS P-type cation-transporting ATPase superfamily signature 635 646 - -
Sto13g3486 1013 PRINTS P-type cation-transporting ATPase superfamily signature 657 667 - -
Sto13g3486 1013 PRINTS P-type cation-transporting ATPase superfamily signature 742 761 - -
Sto13g3486 1013 PRINTS P-type cation-transporting ATPase superfamily signature 766 778 - -
Sto13g3486 1013 PANTHER CATION TRANSPORTING ATPASE 17 992 - -
Sto13g3486 1013 PRINTS H+-transporting ATPase (proton pump) signature 588 606 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto13g3486 1013 PRINTS H+-transporting ATPase (proton pump) signature 742 758 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto13g3486 1013 PRINTS H+-transporting ATPase (proton pump) signature 774 799 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto13g3486 1013 PANTHER CALCIUM-TRANSPORTING ATPASE 17 992 - -
Sto13g3486 1013 Gene3D - 142 986 - -
Sto13g3486 1013 Gene3D - 432 787 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3486 Sto-Chr13 37745555 37748711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3486 20 996 Primary Pumps ATPases AT3G63380 70.232 0.0 1360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3486 K01537 - gmx:100790034 1514.98