Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3478 ATGGGTTGCATGGCGGGCTTCCTTCAGATCTTCGATCGTCACCAGTTACTCACCGGAAAACGCGTCTACTCCGCCAAGCGACTTCCTCCCTCCCTTCCACCCAATTCCTCGCCCGAACCACACAACTTCATTGCGTCTCCGGCGAAATCCAGAGAACTAGACACGCCGCCGCATCCACCAAGATCAACACCGTCGCCTGACCGTGTCAAACACAGCCCCTCCAGAGAGCCCCTATCTCCCGCTCCAGAATCTCAACCCACCATGCCTCTTCCTCTCCCTGTTTTTGAATTCAAGCAAGGCACGAGGTCTTCCTGGAAGTTCTCCAGAGAGGCTCCTAGGCTATCTTTGGACAGTAGAGCCGTTGTGGACGCCAAAGGCACTCTTCACCCCAGAGACATCCGAAGCAGCTCTACAATGTTATCGCCCAATCCATGCGAGAATCCTGCAGATGCTGCGGACAGTGATACTGAGAAACAGCGTCGATCGACGAGCGTGATAGCTAGACTCATGGGGCTCGAGTCCTTGCCAGATTCGCCTCCTGAACCGGTGAAGAATGCTGAGCTCCGAAGATCCGCTTCTGAGTCCAGAGTTAGCAGAGATCTGTTTCAACAACGTTACTTCGACAGTAACAATGTTCAGCGAAAGCAGTTACAGCAGCAGTCAAACTTTCAGGCTAACATTTCCAGCAATGTAGCCAGGGACCATGCAGGAGCTATGGACAATCGTGTATCCAATATCAGACCGGCAGATCCAAAAGAATTTGCTGTACGAAATGGCAAGACAGAGCCTGCAAAAGCTCTTCCCAGGGGAATAGGACAAAAGAAGAGTTTCTTTGATTCCGCTGACTTTTTTCCGGAGCCAAAGCAGACTGTATCTATCTATGGAGAGATTGAGAAGAGGTTGAAGATGAGAGGAATCGATGAGCCATCTAAGGATCTCGAGACTCTCAAGCATATCCTCGAGGCCCTGCAGCTCAAGGGTCTGCTACATTCCAAGAAGTCCACGTCTCCAACCAACCAGAGGAATTTCGTTTTCGACGGAAGCATCTTAGCCAGCGACTCCCCAATTGTTGTGATGAAGCCAGCGCGATCTCCGGCTACTTCATGGAATCGACCTGGAAGGGCGGGTGGTGACTCTCCACCCTCAAGCTTCCGAATGAGTCCTCGAGCTCGCGGCAACCTGAACCTACCCAACGAGACCCTTCCCACAGTGAGTCCGAGGCGTGATAGGCCGGAGGTAAATCGGACTATACGAAATCAAACCAGAGTCAGAAACTCGAGCTTGCAGACTCGCAGCGAGAGCAGTGTAAAGAGCCCAAATCGTATTAGGGTGACGAACACAGAGGACCAGAGGAAAGGGAACGGTCATATTGGTCAGAGAAGGGTATCTCCAGTTCATTCACCAAAGGCAGGTTCCAGAAGGAATGTATCCCATCAGCAAGTGACGAATCGGTCGCCGAGGATGAGAAAACCGGAGGGTGAGATTTACGACAAAGAGAAGGTGTTGGGTGTAGCAGAGGATGAATCATCCACCATTTCAGAAAGCAGCATAAGCACGTCATCGCAGACAGATACAGAGAGATGCAAGCTAGAGGTGTACAAAGAAGGGAGGAATCTACTGGAGAGGTGTGATAAGTTGGTGCACTGCATAGAGGAAATAACTGCGAGCGAGTTGCAGCCGAGTCCAGTCTCGGTACTTGACCCGTCCTTCGACAAGGACGAGTGTTCATCACCTTCCCCAGTGATGAAACGGTGCATTGATTACAGAGATCAACCAGCTGAATCAGAGGATGACATGTGGAGTGCGAATATGTGTTCCATGGGAGGCGCCACATCGGAACAGGACTACGATTTCGTTTATGTATCGGAAATCCTGCGAGCTTCCAATTACTTGCCGGAAGAAGCCAACATATTCCTATTACTGGAGAAGCAGCAATATCTCAAGGGGAAGGACACCTCCAAAGCTTCCACGCTGCAGCGACGATTGATCTTCGACACCATTCACGAAATCCTGAATCGGAATCGACAATTACCGCCGTGGAAGGCGGTTTCATGGATTGGTCAGACGCCGTTGTTGGAGCGGATTTGGTCGGATTTTCGGAGGATCCGACGAGAGAGGGAGAAATCGGAGGACTTGTTCGAGGTGATATGCGGTGTGTTGAGGAAGGACCTGGCGGAGGACGGCATGAATGGATGGGGAGATTGTCCCGTTGAGATGGGTGAGGTAGTTTTAGACATCGAACGACTCGTCTTCAAGgatctcatcggcgaaaccatACGAGATCTTGCGGCGTTTGCCGGTAAATCCAACAAGATCTCGGCGCTACGTAGGAAGCTGATGTTTTGA 2346 0.5077 MGCMAGFLQIFDRHQLLTGKRVYSAKRLPPSLPPNSSPEPHNFIASPAKSRELDTPPHPPRSTPSPDRVKHSPSREPLSPAPESQPTMPLPLPVFEFKQGTRSSWKFSREAPRLSLDSRAVVDAKGTLHPRDIRSSSTMLSPNPCENPADAADSDTEKQRRSTSVIARLMGLESLPDSPPEPVKNAELRRSASESRVSRDLFQQRYFDSNNVQRKQLQQQSNFQANISSNVARDHAGAMDNRVSNIRPADPKEFAVRNGKTEPAKALPRGIGQKKSFFDSADFFPEPKQTVSIYGEIEKRLKMRGIDEPSKDLETLKHILEALQLKGLLHSKKSTSPTNQRNFVFDGSILASDSPIVVMKPARSPATSWNRPGRAGGDSPPSSFRMSPRARGNLNLPNETLPTVSPRRDRPEVNRTIRNQTRVRNSSLQTRSESSVKSPNRIRVTNTEDQRKGNGHIGQRRVSPVHSPKAGSRRNVSHQQVTNRSPRMRKPEGEIYDKEKVLGVAEDESSTISESSISTSSQTDTERCKLEVYKEGRNLLERCDKLVHCIEEITASELQPSPVSVLDPSFDKDECSSPSPVMKRCIDYRDQPAESEDDMWSANMCSMGGATSEQDYDFVYVSEILRASNYLPEEANIFLLLEKQQYLKGKDTSKASTLQRRLIFDTIHEILNRNRQLPPWKAVSWIGQTPLLERIWSDFRRIRREREKSEDLFEVICGVLRKDLAEDGMNGWGDCPVEMGEVVLDIERLVFKDLIGETIRDLAAFAGKSNKISALRRKLMF 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3478 781 PANTHER LONGIFOLIA PROTEIN 2 781 IPR033334 GO:0051513
Sto13g3478 781 Pfam DUF761-associated sequence motif 160 178 IPR032795 -
Sto13g3478 781 MobiDBLite consensus disorder prediction 386 402 - -
Sto13g3478 781 Pfam Domain of unknown function (DUF4378) 617 757 IPR025486 -
Sto13g3478 781 PANTHER OS11G0587300 PROTEIN 2 781 - -
Sto13g3478 781 MobiDBLite consensus disorder prediction 362 492 - -
Sto13g3478 781 MobiDBLite consensus disorder prediction 26 92 - -
Sto13g3478 781 MobiDBLite consensus disorder prediction 470 484 - -
Sto13g3478 781 MobiDBLite consensus disorder prediction 418 443 - -
Sto13g3478 781 MobiDBLite consensus disorder prediction 127 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3478 Sto-Chr13 37713950 37716978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3478 506 781 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 48.582 7.31e-70 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3478 - - jcu:105649918 889.026