Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3467 ATGGCCAACAGAGTTCAAATTCCTTCAAGAAGTTCAGCACTCATTGCTATGATTGCAGATGAGGACACCATAGTTGGATTTCTTCTGGCTGGAGTGGGCAATGTTGACTTGCGCAGGAAGACAAATTACCTTATTGTGGACTCAAAAACAACTGTCAAACAAATTGAAGATGCGTTCAAAGAGTTCACAGCAAGGGAAGATATTGCAATTGTGTTGATCAGCCAATATGTTGCAAATATGATAAGGCTTTTAGTTGATAGCTACAATAAGCCCGTTCCTGCGATCTTGGAGATTCCTTCCAAAGACCATCCTTACGATCCTGCGCATGATTCAGTCCTTTCACGCGTGAAGTGCCTCTTCTCTGCTGAATCTGTGGCATCTGGGAGACGTTGA 393 0.4326 MANRVQIPSRSSALIAMIADEDTIVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTAREDIAIVLISQYVANMIRLLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKCLFSAESVASGRR 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3467 130 Pfam ATP synthase (F/14-kDa) subunit 15 116 IPR008218 GO:0034220|GO:0046961
Sto13g3467 130 SUPERFAMILY AtpF-like 15 99 IPR036906 GO:0034220
Sto13g3467 130 TIGRFAM V_ATP_synt_F: V-type ATPase, F subunit 12 124 IPR005772 GO:0033180|GO:0046961|GO:1902600
Sto13g3467 130 PANTHER V-TYPE PROTON ATPASE SUBUNIT F 1 130 - -
Sto13g3467 130 Gene3D ATPase, V1 complex, subunit F 9 122 IPR036906 GO:0034220
Sto13g3467 130 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 1 130 - -
Sto13g3467 130 PIRSF V-ATP_synth_F 3 123 IPR005772 GO:0033180|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3467 Sto-Chr13 37655972 37658444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3467 1 126 Primary Pumps ATPases(2) AT4G02620 86.508 2.10e-80 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3467 K02151 - tcc:18613243 237.269