Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3465 ATGGCAAATAACCCTTCCGAGGCTCCTACCGATGACTTCTTCGAACAAATCCTCGGACTCCCCACCTTCGCTTCCATTGACTCCGGCTTGACTGCAGCCGATGTTGGCTTGTCCGGTACGCCTTCTCCGGCTCCTATGATGCTGCAGCTCAACTCCGGCGATGCCACCGCCGTTGCCGCTGGTGCTGGCGCCACCAGTGGCTTTCATGGACCAGTGTACCAGTTAGGCCTGAGTTTGGAGCAAGGAAAAGGAGGGTATTTTAAGCCCGAGGACGCTTCGGGGAGTGGGAAGCGGTTTCGCGACGATGTTGTTGATGGTAGAGCTAAGAATGTTTTTCATGGGCAATCTATGCCTACTACCATGCCTATTGCACCACATCCACCAACAATGCGGCCAAGGGTGCGGGCTAGAAGAGGACAGGCTACAGATCCACACAGCATAGCTGAACGGTTGCGCAGAGAAAGAATAGCAGAAAGAATTAGGGCCTTGCAGGAGCTGGTTCCTAGTGTCAACAAGACAGATAGAGCTGCCATGCTAGATGAAATTGTGGattatgtcaagtttttgaGGCTTCAAGTGAAGGTTTTGAGCATGAGCAGATTGGGTGGAGCAGGTGCAGTGGCACCACTTGTAACCGACATCCCATTATCATCGGTTGagGAGGAGGGCGGGGAAGCTGGAAGAAATCAAGCAGTTTGGGAGAAGTGGTCGAATGATGGCACAGAAAAACAGGTAGCTAAGCTTATGGAAGAAAATGTTGGAGCTGCCATGCAGTTCCTTCAATCAAAGGCTCTCTGCATAATGCCCATCTCACTCGCATCAGCAATATACCATTCACAGCCACCAGACACCTCTACCATAGTGAAGCCTGAAACTAATCCTCCTTCATAG 891 0.5051 MANNPSEAPTDDFFEQILGLPTFASIDSGLTAADVGLSGTPSPAPMMLQLNSGDATAVAAGAGATSGFHGPVYQLGLSLEQGKGGYFKPEDASGSGKRFRDDVVDGRAKNVFHGQSMPTTMPIAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGGEAGRNQAVWEKWSNDGTEKQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHSQPPDTSTIVKPETNPPS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3465 296 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 285 - -
Sto13g3465 296 Pfam Helix-loop-helix DNA-binding domain 145 189 IPR011598 GO:0046983
Sto13g3465 296 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 138 199 IPR036638 GO:0046983
Sto13g3465 296 SMART finulus 146 195 IPR011598 GO:0046983
Sto13g3465 296 MobiDBLite consensus disorder prediction 114 144 - -
Sto13g3465 296 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 140 189 IPR011598 GO:0046983
Sto13g3465 296 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 285 - -
Sto13g3465 296 Gene3D - 135 197 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3465 Sto-Chr13 37645106 37648933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3465 68 295 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 80.000 1.38e-119 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto13g3465 HLH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3465 - - gmx:100797789 489.189