Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3463 CTGAATCTGAAGGACACAGAGCTAAGGTTGGGATTGCCGGGAACAAATGAGGAGGCGGCCAAACGTTTCAGTGTTGGAAGCAAAAAGAGATGTTTAGCAGAGGAAACAAGCagtgaggaggaggaggactaCTCAATGAACAAGAGTTGTATTATTGATGACACAAGTAGTGATCATGACAATGAGCCACCAGCTAAGGTACAAGTAGTGGGATGGCCACCTGTGAGAAATTTCAGGAAGAATATGGTGAAGAATGGTAGTAGTAGTGGTGTACAAAAGTATGTGAAAGTGAGCATGGCTGGTGCACCATACTTGAGGAAGATAGATCTCAAGGTTTACAGCACCTATCCTCAACTCCTCAAGGCCTTGGAGAATATGTTCAAGTGCACTTTTGGTGAATATTCAGAAAGGGAGGGGTACAATGGGTCTGAATATGTTCCAACGTACGAAGACAAGGATGGTGATTGGATGCTGGTTGGAGATGTTCCATGGGAGATGTTCATGTGCTCTTGCAATAGGCTCCGAATCATGAAAGCATCCGAAGCTAAGGGGTTCGGTTGCTTATGA 567 0.4303 LNLKDTELRLGLPGTNEEAAKRFSVGSKKRCLAEETSSEEEEDYSMNKSCIIDDTSSDHDNEPPAKVQVVGWPPVRNFRKNMVKNGSSSGVQKYVKVSMAGAPYLRKIDLKVYSTYPQLLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWEMFMCSCNRLRIMKASEAKGFGCL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3463 188 PANTHER AUXIN-INDUCED PROTEIN 1 186 - -
Sto13g3463 188 Gene3D - 87 187 - -
Sto13g3463 188 SUPERFAMILY CAD & PB1 domains 88 178 - -
Sto13g3463 188 Pfam AUX/IAA family 27 185 IPR033389 -
Sto13g3463 188 ProSiteProfiles PB1 domain profile. 92 179 IPR000270 GO:0005515
Sto13g3463 188 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 186 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3463 Sto-Chr13 37634364 37635142 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3463 89 183 B3 DNA Binding Superfamily AT2G46530 33.684 9.36e-10 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Sto13g3463 AUX_IAA 1.5e-53 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3463 K14484 - gmx:100780752 247.669