Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3432 ATGAGTGGATGTGGTTCTCCTTGTGGAGCGTGCAAATTCTTGAGAAGGAAATGTGTGAGAGGTTGTGTTTTTGCACCTTACTTTTGCCATGATCAAGGTGCTACTCATTTTGCAGCCATTCATAAGGTGTTTGGTGCAAGCAATGTGTCCAAGCTTCTCGCCCATCTTCCTCTCACTCATCGATGTCAAGCTGCCCTCTCTATCTCTTACGAAGCTCAAGCCAGGCTTCATGATCCTATTTATGGCTGTGTTTCCCATATCTTCGCCCTTCAACAGCAGgtggtGAATTTGCAAGCACAGCTTGCTTATCTCAAAGAACAAGCATTATTATCTCAGAGCTTTGTGAATGCTTCTGCCAGTAgtactgaaaaccctaaacctactactactactgctgctgctgatgatgatgatcttcAAGGTTGGTTCCTGCAGACCCAAAATTACTCCAACGACATGGGCCCACAAGTGTTGTTTGGTCCGAACAATTCCTCATCAACAACCTTATCTGCACAACAACACTATGTTACAGATCTGATGAATATGGATCCAAACCCTAACAATTCAGGAAGGCTGCAGGTCCAGCAAGAAGAAACCATCTCATTTTCTAGCTTTCACGATATTTCCTGCGACATGCAACAAACCTTTCATCAACTGGATGACCTTCACTCCCTGGCTTTTGGTTTCACTCCATCcgcttcatcatcatcaatttgGTGA 720 0.3931 MSGCGSPCGACKFLRRKCVRGCVFAPYFCHDQGATHFAAIHKVFGASNVSKLLAHLPLTHRCQAALSISYEAQARLHDPIYGCVSHIFALQQQVVNLQAQLAYLKEQALLSQSFVNASASSTENPKPTTTTAAADDDDLQGWFLQTQNYSNDMGPQVLFGPNNSSSTTLSAQQHYVTDLMNMDPNPNNSGRLQVQQEETISFSSFHDISCDMQQTFHQLDDLHSLAFGFTPSASSSSIW 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3432 239 Coils Coil 87 107 - -
Sto13g3432 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 1 231 - -
Sto13g3432 239 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 231 - -
Sto13g3432 239 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Sto13g3432 239 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3432 Sto-Chr13 37427475 37428299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3432 7 143 AS2 family AT3G58190 69.065 6.34e-65 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto13g3432 LOB 3.1e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3432 K13945 - gmx:100776678 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0687 8 4276946 4289125 Sto13g3432 13 37427475 37428299 CCT
Sto13g3432 13 37427475 37428299 Sto13g3432 13 37427475 37428299 ECH